Gene Mext_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4548 
Symbol 
ID5832799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5081157 
End bp5081453 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content63% 
IMG OID641370342 
Productacyl carrier protein 
Protein accessionYP_001641987 
Protein GI163853944 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00748175 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCGAACG AGACCGCCAC CTTCGACCGC GTCGCGGATA TCATTGCCGA GACGGCGGAT 
ATCCCGCGTG ACAAGATCAC GCCCGAGAGC CACGCCATCG ACGATCTCGG CATCGATTCG
CTCGCCTTCC TCGACATCGC CTTCGCGGTC GACAAGGCCT TCGGCATCAA GCTGCCGCTG
GAGCGCTGGA CCCAGGAAGT CAACGAGGGC AAGGTTCCGG CCGAGCAGTA CTTCGTGCTG
AAGAACCTCT GCGCACGCAT CGACGCTCTG GTCGCCGAGA AGGCCGCCAA GGCCTGA
 
Protein sequence
MSNETATFDR VADIIAETAD IPRDKITPES HAIDDLGIDS LAFLDIAFAV DKAFGIKLPL 
ERWTQEVNEG KVPAEQYFVL KNLCARIDAL VAEKAAKA