Gene Mext_4311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4311 
Symbol 
ID5831112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4794993 
End bp4795745 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content74% 
IMG OID641370102 
Producthemolysin A 
Protein accessionYP_001641751 
Protein GI163853708 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0672112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCG AGCGGCTCCG GGCCGACCGG TTCCTGGTCG AGCGCGGGCA TTTCCGCAGC 
CGGGCGCAGG CGCGGGCGGC GATCGAGGCC GGCCTCGTCA GCGCCGACGG CCGCCTCGTC
ACGCGCCCCT CGGATCTGGT CGAGGCCGGC GCCCGGATCG AGGCTTCGGC CCCCCACCCC
TATGTCTCCC GCGGCGGCCT CAAGCTCGCT GCGGCGCTCG ATGCCTTCGG CCTCGACCCC
GCGGGCCTGC CTTGCCTCGA TGTCGGCGCC TCGACCGGCG GCTTCACCGA CGTGCTGTTG
CGGCGCGGCG CCGCCCATAT CCACGCGGTC GATGTCGGCC GCGACCAGCT CGACGCCGCC
TTGCGCGCCG ACCCACGGGT GACCAGCCTG GAGGGCACCG ATATCCGCGC CCTCTCTCCG
GGGGCGATTC AACCCGCGCC GCAGCTGGCC ACCATCGATG TGAGCTTCAT CGGCCTGCGG
CTGGTCCTGC CGGCTGTGGC GGCGCAGCTT GCCGACGAGG CCGCCATCGC CGCGCTGATC
AAGCCGCAAT TCGAGGCCGG GCGCGAGCGG GTCGGGCGCG GCGGCATCGT GCGCGACGCC
GAGGTTCATG CTGAGGTCTG CGAGGGCGTG CGCGCCGTGC TCGTCGGCCT CGGATTCACC
GTGTCGGGGC CGATCCCCTC CCCCATCGAG GGCGGCGACG GCAACCGCGA ATTCCTGGTC
GCCGCGAGGC GTTCCTCTGA TGATTGCCTC TGA
 
Protein sequence
MTGERLRADR FLVERGHFRS RAQARAAIEA GLVSADGRLV TRPSDLVEAG ARIEASAPHP 
YVSRGGLKLA AALDAFGLDP AGLPCLDVGA STGGFTDVLL RRGAAHIHAV DVGRDQLDAA
LRADPRVTSL EGTDIRALSP GAIQPAPQLA TIDVSFIGLR LVLPAVAAQL ADEAAIAALI
KPQFEAGRER VGRGGIVRDA EVHAEVCEGV RAVLVGLGFT VSGPIPSPIE GGDGNREFLV
AARRSSDDCL