Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4280 |
Symbol | |
ID | 5834706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4763055 |
End bp | 4763654 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641370071 |
Product | TrpR binding protein WrbA |
Protein accession | YP_001641720 |
Protein GI | 163853677 |
COG category | [R] General function prediction only |
COG ID | [COG0655] Multimeric flavodoxin WrbA |
TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.021842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGG TTCTGGTGCT CTACTACTCG TCGTGGGGCC ATGTGGAGCA GATGGCCAAG GCCGTGGCCG AGGGCGCCCG CGAGACCGGG GCCGAGGTCG CGCTCAAGCG CGTGCCGGAA CTGGTGCCGG ACGAGGTCGC CAAGCAGTTC CACTACAAGC TCGATCAGGA GGCGCCGATC GCCACCGTCG AGGAACTGGC CGATTACGAC GCGATCATCT TCGGCACGCC GACCCGCTAC GGCAACATGG CGTCGCAGAT GAAGCAGTTC ATCGACCAGA CCGGCGGCCT GTGGGCCAAG GGCGCGCTGG TCGGCAAGGT CGGCTCGGCC TTCACCTCGA CCGCCTCGCA GCACGGCGGC CAGGAGACCA CGCTGACGAG CTTCCACACG GTGCTGTTCC ACCACGGCAT GGTGGTGGTG GGCCTGCCCT ACAGCTTCGC GGGGCAGAAC GGCGTCGAGC AGGTGAAGGG CAATTCCCCC TACGGCGCCA CCACGATCGC TGACGGCGAC GGCTCGCGCC AGCCTTCCGA GGTCGAACTC GACGGCGCCC GCTTCCAGGG CCGCCACGTG GCCGGCATCG CGGCCAAGCT CGCGGGCTGA
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Protein sequence | MAKVLVLYYS SWGHVEQMAK AVAEGARETG AEVALKRVPE LVPDEVAKQF HYKLDQEAPI ATVEELADYD AIIFGTPTRY GNMASQMKQF IDQTGGLWAK GALVGKVGSA FTSTASQHGG QETTLTSFHT VLFHHGMVVV GLPYSFAGQN GVEQVKGNSP YGATTIADGD GSRQPSEVEL DGARFQGRHV AGIAAKLAG
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