| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4121 |
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| Symbol | |
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| ID | 5833974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4579905 |
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| End bp | 4582262 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641369912 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001641562 |
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| Protein GI | 163853519 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.922703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAG ATCGCGCCGT TTCTGCTCGG CCGGCTCCGC GTGCGGGCCA AATCGCGCGC
CTGCTCGCCT CGACCTTCCT GTCGGGAACG GCCCTGTTCG GCCTCGCCGT ACCGGGCCTC
GCACAGGAGG CGGCCGGCGC CGTCGAGCTG TCCGAGTTGA GCGTGACCGG CGAGGGCCGC
GGCGCCACGC TCGGCGGCGC GCTGTACGGC CCCGGCGGCG CCCAGGGCGC CGTGCCGGGC
TACGTCGCCA GCCGCAGCAC CGTCGCGACC AAGACCGACA CGCCGATCCT GGAAACGGCC
CAGTCGATCT CCGTCATCGG CCGCAAGCAG ATCGAGGACC AGAACGCGCT CAGTATCAAC
CAAGCGCTGC GCTACACCCC GAGCGTCACC ACCGAGCAGC GCGGCGGCGC CGGCTCGACC
CGGCTGGAGC AGTTCCTGAT CCGCGGCTTC AACGCGCCGG TCTTCCTCGA CGGCATGGCG
CTGATCGGCG GTCGCGACGC CAACGCCACG ATCGAGCCCT ACCGGCTGGA ACGCATCGAC
GTCATCAAGG GCCCGGCCTC GGTGCTCTAC GGGCAGTCGG GCCCGGGCGG CATCGTCAAC
CTCGTGTCGA AGGTTCCGCA ATTCGTCCGC CACGGCGAGG TCTTCGTCCA GGGCGGCGGC
TTCAGCGAGG TGCGCGGCGG CGTCGATGTC GGCGGCCCGA TCCAATCGGA CGTGCCCTGG
CTCGCCGACC AGTTCGCCTA CCGCATCGTC GGCTTCGGCT GGAACGGCGA CGGCCCCGTG
GACACGACCC GGGTCGAGCG GGCGCTGATC AACCCGAGCC TGTCGTGGCG CCCTTCCGCC
GACACGCAGC TCACGATCAT CGGCAACTAC CAGCGCGATC CGTTCTCGGG CTTCTACGGC
GGCTTCCCGG CGGTGGGCAC AGTGTTCCCG CGCAATTTCG GCAACGGCAT CATCGGCCGC
CTCCCGGTGA ACTTCTACGA CGGCGACCGC GGCATCGAGC GCTCGGACCG GACCCAGGCC
TCGATCGAGT ACCTGTTCGA TCACCGCTTC AGCGAGAACC TGCGCTTCCA CTCGGCCGGG
CGCTACCTGC GCACGCAGGG CGACTACCGC AGCGTCTACA GCGCCTTCAA TCCCCGCAAC
GGCCCCTTCG CCAGCGGCCC GCTGATCCCG CGCGCGGTCA TCGGAACCAA CGTGGCGGCG
GAAGCCTACA CGATGGACAG CAACTTCGTC GCCAACTTCG ACACCGGCTT CATCGCCCAC
ACCGCGCTGC TCGGCGTCGA TCACCGCACC TTCAGCACCC GGACGAGCGG CTCCCCGTTC
CCGGACGCGC CGGACCTGAA CGTGCTGGCG CCGAACTACA ACATGAACAT CGCGGTCCCG
GCCTTCAACA CGGTCTCGCG GGTCGATGCG CAGCAGACCG GCGTGTACTT CCAGGATCAA
GCAAAGTTCG ACCGCCTCGT GCTGACGCTG GGCGGGCGCT ACGACGTCGC GCGCCAGACC
GGGCCGACCC GCTCCTTCGC CGCCGGCAGA CCGAGCACCC TGACGCTCCA GAACGCACCG
GCCGACGCCT TCACCGGCCG GGCGAGCCTG CTCTACCTGT TCGATTCGGG CGTGGCGCCG
TACGTGTCCT ACAGCCAGGC CTTCGAGCCG ATCGTCGCGG GCCGCGTGTT CGATCCGGCC
TTCGGCACCG TCGGGCGCGT GCCCGATCCG CAATCGAGCG ACCAGTACGA GGCCGGCATC
AAGTACCAGC CGCCCGGCAC CGACATCCTG CTCACCGCCG CCTTCTTCGA CATCCGCCAG
TCGAACCGCA CGACTGCGGA CCCGGTGAAC GGCAGCACCT ACGTCGTCCA GACCGGACAG
GTCGGGGTGC AGGGCATGGA GTTCGAGGCG CGGGTAAACC TGACCGAGGG CGTCACCCTG
GTCGGCGGCT TCTCGCTCCT CGATATCCGC AACGTCCGCG ACGACGGCCG AACCGCCAAC
GACCTGACCC CCGGTCAGAC GGTGCCGCTC CAGGGCCGCA GCCCGGTTCT GGTGCCGGAT
TCCACCGCCT CGCTGCTGGC GACCTACCGC TTCAGCGAGG GGCCGCTCCT CGGCCTCGAA
GTCGGCGGCG GCGTGCGCTA CCTCGGGCCG TCCTGGGGCG ATGCGGCCAA CACCTTCAAG
GTGCCGGCCA GCGTGCTCGT CGACGCCACC CTCAACTATG ACTTGAAGTA CCTCGACGCG
ACGCTCCAGG GCTTCTCGAT GCAGTTGAAC GCCAATAACC TCCTCGACGA GCGCTACGTC
AGCGGCTGCA ACGGCTACAC CAGTTGCTAT TACGGCCTGC CGCAGACCGT CTATGCAACC
CTGCGCTATC GCTGGTAG
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| Protein sequence | MFEDRAVSAR PAPRAGQIAR LLASTFLSGT ALFGLAVPGL AQEAAGAVEL SELSVTGEGR
GATLGGALYG PGGAQGAVPG YVASRSTVAT KTDTPILETA QSISVIGRKQ IEDQNALSIN
QALRYTPSVT TEQRGGAGST RLEQFLIRGF NAPVFLDGMA LIGGRDANAT IEPYRLERID
VIKGPASVLY GQSGPGGIVN LVSKVPQFVR HGEVFVQGGG FSEVRGGVDV GGPIQSDVPW
LADQFAYRIV GFGWNGDGPV DTTRVERALI NPSLSWRPSA DTQLTIIGNY QRDPFSGFYG
GFPAVGTVFP RNFGNGIIGR LPVNFYDGDR GIERSDRTQA SIEYLFDHRF SENLRFHSAG
RYLRTQGDYR SVYSAFNPRN GPFASGPLIP RAVIGTNVAA EAYTMDSNFV ANFDTGFIAH
TALLGVDHRT FSTRTSGSPF PDAPDLNVLA PNYNMNIAVP AFNTVSRVDA QQTGVYFQDQ
AKFDRLVLTL GGRYDVARQT GPTRSFAAGR PSTLTLQNAP ADAFTGRASL LYLFDSGVAP
YVSYSQAFEP IVAGRVFDPA FGTVGRVPDP QSSDQYEAGI KYQPPGTDIL LTAAFFDIRQ
SNRTTADPVN GSTYVVQTGQ VGVQGMEFEA RVNLTEGVTL VGGFSLLDIR NVRDDGRTAN
DLTPGQTVPL QGRSPVLVPD STASLLATYR FSEGPLLGLE VGGGVRYLGP SWGDAANTFK
VPASVLVDAT LNYDLKYLDA TLQGFSMQLN ANNLLDERYV SGCNGYTSCY YGLPQTVYAT
LRYRW
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