Gene Mext_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4116 
Symbol 
ID5834848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand+ 
Start bp4576707 
End bp4577336 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content74% 
IMG OID641369907 
Productnuclease 
Protein accessionYP_001641557 
Protein GI163853514 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.373469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.63366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA CCGCCACCAT TCTGCTGATC TACGCTGCCT GCCTCGCCGG CACCATCGCC 
AGCCCGGCCC GATCCCAAGA TGATCACCCC CAAGATGATC GTGCCTCGGA AGGACCGGGC 
ACCCGGCGCC TGCTGGCCGC GCTCCTCGTT CCCGCGCTGG CGCTGCTCGC CGGATTGCAG 
GCGCTGCCGG CCCGGGCGGG CGAGGCGGCG CCCCGGATCG TGAGCGGCCC CGCCACGGTG 
ATCGACGGCG CGACCCTCGA CCTCGGCGGC CGGCGCCTGC GGCTCTACGG GATCGATGCG 
CCCGATCTCG ACCAGACCTG TTCCGACGGG CACGAGCGCG ACTATGCCTG CGGCCGCGCC 
GCCGCCGCGG CGCTGACGGC GCGGATCGGC GGGGAGAGCG TCACCTGCGA GCTGCGCGAG 
GCGGACGGTA CAGCCCTTTG CCGGCACGAC GGCGAGGACC TCGCCGCCTG GATGGTTACC 
AACGGCTACG CCATCGCCGA TCGCAGCGCG CCGGCCGCCT ACGAGGCTCA GGATCGGCGC 
GCCTGGGGCC GCCGAGTCGG GCTGTGGTCG GGCGTGTTCG AGATTCCCGC CGACCGGCGC 
CGGATGCGCC GCGCCAGCGC CTCGCTCTGA
 
Protein sequence
MSLTATILLI YAACLAGTIA SPARSQDDHP QDDRASEGPG TRRLLAALLV PALALLAGLQ 
ALPARAGEAA PRIVSGPATV IDGATLDLGG RRLRLYGIDA PDLDQTCSDG HERDYACGRA 
AAAALTARIG GESVTCELRE ADGTALCRHD GEDLAAWMVT NGYAIADRSA PAAYEAQDRR 
AWGRRVGLWS GVFEIPADRR RMRRASASL