| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4083 |
|---|
| Symbol | |
|---|
| ID | 5832964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4542662 |
|---|
| End bp | 4543825 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641369874 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001641524 |
|---|
| Protein GI | 163853481 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03476] putative membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0934508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.448511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAGG CACCTGCTCG CCGTGGGGAT CAGCGCGCAG ATCCCTCCTC GGACCTACCC
GCCGAACAGG CGCGACCGGG GCGTCTCCTG CGCGGGCTGC TGCGCCGGTT GCCGCTCGTC
GGCACCCTGG TCGGGCTGGG GCTGGGCGTC TGGCTCGTCG CCACCAACGA CCTTGCGGCG
ATCGGTGCGG CCTTCGGGCG GATCGGTCCG GCGGGGCTGG CCGCCATCGT CGGGGTGCGG
GCCGTCATCG TGGTGCTGTG CGGGCTCGCC TGGGCGCGGG TGCTGCGCGG CATCCCGCCG
TCGGGACGTC ACGCCCATCC CGCGAAGGCC GCCGCCGAGC CCCCTGTCGA GACCGGCGCC
TTCGTGATCC TGCGCTTCGT GCGCGAGGGC GTGAACGTGC TCCTGCCGGT CGCCTCGGTG
GGCGGCGAGG TGGTGGGCGG GCGCCTGCTG ACCTTCTGGG GCGTCGCGGG CAGCCTCGCG
GCCGCCTCGC TGCTGGCCGA CATGCTGATC CAGGTCGCGA CGCAGGTGGC CTTCACCGGG
CTCGGCGCCG GCCTGCTCTG GCGGCTGCCG GGGGAGGCCG CCGCCGTGCT CGCATGGTGG
ACGACGCAGG CCGCCGTGGT GGCGGTGGCG GCGGTCGCCG CCTTCTTCGC CCTGCAGACG
CTCGGCGCGG CGCGGGGGCT GGAGCGGCGC CTCGCCGCCC TCGGGCGCCG CTTCCTGCGC
TCGGCGGCCC CGGAGGGGGC GAAACCGGAG GCAAGCGCGG CAGGCATCCT CTCTGTGCAG
GAGGCCCTTG ATGTGGTCTG GGCCCGCGAG CGCCGCGGGC CGATCGCTCA ATCGGTCGCC
CTGCACGCCG TGGCCTGGGG GCTCGGCGCG GCCGAGATCT GGATCGTGCT CGCCTGCATC
GGGGTCGAGG TGAGCCTGAC CGAGGTGTTG GTGCTGGAAT CGCTCTCGCA GGCGATCAAG
TCGGCGGCCT TCGCCGTCCC GAGCGGGCTC GGCGTGCAGG AGGGCGGCTT CGTGGTGGTG
GGTGCCCTGT TCGGGCTCGA TGCGGGCACC GCCATCGCCC TGTCGCTCGC CAAGCGCGTG
CCCGACGTGG CGCTGGGCCT GCCCTCGCTG ATCGTCTGGC AGACCCTGGA AGCCAAGCGG
GCGCAGGTGC TGCCGCCACG CTGA
|
|---|
| Protein sequence | MVEAPARRGD QRADPSSDLP AEQARPGRLL RGLLRRLPLV GTLVGLGLGV WLVATNDLAA
IGAAFGRIGP AGLAAIVGVR AVIVVLCGLA WARVLRGIPP SGRHAHPAKA AAEPPVETGA
FVILRFVREG VNVLLPVASV GGEVVGGRLL TFWGVAGSLA AASLLADMLI QVATQVAFTG
LGAGLLWRLP GEAAAVLAWW TTQAAVVAVA AVAAFFALQT LGAARGLERR LAALGRRFLR
SAAPEGAKPE ASAAGILSVQ EALDVVWARE RRGPIAQSVA LHAVAWGLGA AEIWIVLACI
GVEVSLTEVL VLESLSQAIK SAAFAVPSGL GVQEGGFVVV GALFGLDAGT AIALSLAKRV
PDVALGLPSL IVWQTLEAKR AQVLPPR
|
|---|
| |