| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3919 |
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| Symbol | |
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| ID | 5834123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4354766 |
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| End bp | 4355986 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641369710 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001641361 |
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| Protein GI | 163853318 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.556135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGG TCACCATGCT GGTCATGAGC CTTGCCGCGG CCGCTGCGGG CTTCCTGGCC
GTCGAGTGGC GGATCCTGCG CAACCCCGCG CTGCTGCTGT GGAGCGCGGG CTTCGCCACG
ATCGTCCTCG GCTGCGCGCT CTCGCCGGTC CGCGCCGCCT CCTTCCTCGT CGGGGTCTGG
TTCGCCAACG GCCTGCTCGT CGTCGCCCAC CTCCTGTTCC TCTTCGGCAC GGCCCGCTTC
ACCGGGCGCC GGATCGCACC GCTCTGGTGG GGCCTGCTGC TGGCCTGGGC CGGGCTCCTG
CTCCTGCCGG CGGGGATCGA CCCGACGCCG GCCTTCGCGA TGACCAATTC CGGCCTCGTC
GCCCTTGCCG CCCTGCGGGC CGCCCATCTC CTGCTGTCGC GGGCCGGCAC GCCCTTCCCG
GAGCGCACCG CCGCCTCCGA CGCGCTCGGC GCCGTCTTCC TCGCCCACGG CACCTTCTAC
GCCGTCAAGG CGCTGCTCGT GCCCGTGCCT GGCGCCTTCG TCAGCCTCGT CGGCTTCAAG
GGCGTGCTGA TCCAGGTCTC GCTGTTCGAG GGCATCCTCG TCGAGATGCT GCTCGCGCTG
CTGATGGCCG CCGCGGTGCG CCGCCGCCGG GAGGAGGCGA TGACGGCGCT CGCCGAGCGC
GATCCCCTCA CCGGCGCCTT CAACCGCCGC GCCTTCGAGA GCCGCGCCGC GGAGGCGTTG
CGGGACATGG CCGCCGGGCG CCAGTCCGGC GCCCTGCTGC TGCTCGACGT GGACCGGTTC
AAGACGGTCA ACGACAGCTT CGGCCATGCC GTCGGCGACC GCATCCTCGT GGCGCTCACC
GGCGTGCTGG AGGCCTGCCT GCCGCACCAC GCGATCCTGG CACGGCTCGG CGGGGACGAG
TTCGTGATCC TGGTGCCCGG CCTCGACGAG GCGGCGGCAT CCGCGCTCGG CGCGGCGATC
CGCGACCGCA TGGCCCGCGA GAGCAGCCGG AGCCTGCCCA CCGGCGCCAC GGTCAGCCTC
GGCGCCGCCC TGTTCAGCGG TGGCCCGGCC GGGCTCGACA CCCTGATGGC GCTCGCCGAC
ACGGCGCTCT ACGAGGCCAA GGCCCATGGC CGCGACCGGC TGCAGGCCCG CCGCCTGGAG
CCGCCGGCGG AGCGGGTCCC GGATCGATCC GGGCCGGGGG CGGCGACGCA CATGTCCGCG
CAAGGTGGCT GCTGCGCCTA A
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| Protein sequence | MDVVTMLVMS LAAAAAGFLA VEWRILRNPA LLLWSAGFAT IVLGCALSPV RAASFLVGVW
FANGLLVVAH LLFLFGTARF TGRRIAPLWW GLLLAWAGLL LLPAGIDPTP AFAMTNSGLV
ALAALRAAHL LLSRAGTPFP ERTAASDALG AVFLAHGTFY AVKALLVPVP GAFVSLVGFK
GVLIQVSLFE GILVEMLLAL LMAAAVRRRR EEAMTALAER DPLTGAFNRR AFESRAAEAL
RDMAAGRQSG ALLLLDVDRF KTVNDSFGHA VGDRILVALT GVLEACLPHH AILARLGGDE
FVILVPGLDE AAASALGAAI RDRMARESSR SLPTGATVSL GAALFSGGPA GLDTLMALAD
TALYEAKAHG RDRLQARRLE PPAERVPDRS GPGAATHMSA QGGCCA
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