Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3887 |
Symbol | |
ID | 5834405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4315140 |
End bp | 4316114 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641369678 |
Product | PDZ/DHR/GLGF domain-containing protein |
Protein accession | YP_001641329 |
Protein GI | 163853286 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.204863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.15793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGC ACGGCGAATT CAGGATTCCG GCCGCCCTGC AGCCGAAGGC CGGCGACTAC GCCTACGATC TGGAGCGGGC GCTGACCTCG GTCGTGTCCC TCTCCTCGCG GGTGCCGGCG GAGGCCTTCA CGGCGGAGAC GCTCGGCACC GAGCGGGCGG GCAACGGCGT GGTGATCCGC GAGGACGGGC TGGTGCTCAC CATCGGCTAC CTCGTGCTGG AGGCCGAGAG CGTCTGGCTC ACCACCCATG ACGGGCGCTC GGTGCCGGCC CACGTCGTCG GCTATGACGG GGAGACCGGC TTCGGCCTCG TCCAGGCGCT CGGCCGCCTC GGCCTGCCCG CCCTGAGGCT CGGGCGCTCG GATACGTTGA AGGTCGGCGA GCGGGCGGTG ATCGCGGGGG CGGGCGGACG CTCGCACAGC CTCGCGGTCG AACTCGTCGC CCGGCAGGAA TTCGCCGGCT ACTGGGAGTA CGTCCTCGAC GACGCCCTGT TTACCACCCC CGCCCACCCG CACTGGGGCG GCACCGCCCT GATCGGGCCC GACGGCGCGC TGGTCGGCAT CGGCTCGCTT CAGCTCCAGC AGGGCGGCAC GGGGGCGGGC CGGGCGATCA ACATGGTCGT GCCGATCGAA CTCCTGCCGC CGATCCTGAC CGATCTCGAG ACCCGTGGCC GGGCCGACCG CCCGCCCCGC CCCTGGCTCG GTCTCTACGC CACGGAGACC GAGGACGGCG TCGTGGTGAT GGGGACCGCG GACAGGGGCC CGGCGGAGGC CGCCGACCTG CGCGCGGGCG ACGTGCTGAC CGAGGTGGCG GGCGAGCCGG TCGCCGACCT CGCCGGCTTC TTCCGGCAGG TCTGGGCCCT CGGGGAGGCG GGGGTGCGCG TCCCCCTCAC GGTCAACCGG GACGGGCGCC TGACCCGGCT CGCGCTGACC TCGGTCGATC GCGAGCGGTT CCTGATCGGG CCGAAGCTGC ACTGA
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Protein sequence | MSAHGEFRIP AALQPKAGDY AYDLERALTS VVSLSSRVPA EAFTAETLGT ERAGNGVVIR EDGLVLTIGY LVLEAESVWL TTHDGRSVPA HVVGYDGETG FGLVQALGRL GLPALRLGRS DTLKVGERAV IAGAGGRSHS LAVELVARQE FAGYWEYVLD DALFTTPAHP HWGGTALIGP DGALVGIGSL QLQQGGTGAG RAINMVVPIE LLPPILTDLE TRGRADRPPR PWLGLYATET EDGVVVMGTA DRGPAEAADL RAGDVLTEVA GEPVADLAGF FRQVWALGEA GVRVPLTVNR DGRLTRLALT SVDRERFLIG PKLH
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