| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3855 |
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| Symbol | |
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| ID | 5833705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4279811 |
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| End bp | 4281127 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641369645 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001641298 |
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| Protein GI | 163853255 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.336679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.260987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATG ACGCCCGTCC GATCCGACCG GAGGATTCGC CCGTGACCGA CGGCGAGGAC
AAGAAAATCC CGCCGCCGCC GGGCAAGGGC GGCTTCGTGT GGGCCGGGCT GATCGCGCTC
GGCCTGCTGG CCTATGGCGG CTACGGCCAC TGGCAGCGGG CGGCCCGGGC CGAGTCGACG
CGGGCCCGGC AGATGGAGTT CGTGCCGAAA GTGCGCACCG AGGAGGCCAA GCGCCTCGAC
GGGCCGATCG AGCTGACCCT GCCGGGCCAG ACCGAGCCCT TCGCCACCGC ACGGATCTAT
CCCCGCGCCA CCGGCTACAT CGCCGAGCGC CATGTCGATC TCGGTTCGCG GGTGAGGAAG
GGCGACGTGC TCCTGCGCAT CGCCGCCCCG GATCTCGACC AGCAACTCGC GCAAGCCGAG
GCGCAGCTCG GGCAGCTCGA GGCCCAGCTC CTGCGGGCCC GGGCCATGGT CGATCAGGCC
AAGGCCAATA CGAACCTCGC CCAGGCCACC AACTCGCGCA CCTCGACGCT CGCCGGCCAG
GGCTGGGCCT CGAAGCAGAA CGCCGACAAC ACCCAGGCCG GCGTGCTGGC GCAGCAGGCG
AACCTCGCCT CGGCGGAGGC CGACGTGAAG GTGGCCCAGG CCAACATCAA GGCGCAGCAG
GCGACCGTCG GCCGCCTCAA GGCGCTGACC GGCTTCGAGA TCGTCACCGC CCCCTTCGAC
GGCGTGATCA CCACCCGCAA CGTCGATGTC GGCGACCTCG TCCAGGCCGA TGCCGGCTCT
GGCTCGCCGC TCCTGTCGAT GGACCGGGAC GACGTGCTGC GCATCTCGGT CAACGTGCCG
CAGAACGCGG CGGTGGGCGT GCAGCCCGGC ATCGCGGCCC AGATCAAAGT GCCGCAGATG
CCCGACCGCA GCTTCGCCGG CGTGGTCGAG CGCAGTTCGG TGGCGTTGCT TGCCTCCTCG
CGCACCCTGA CGACGCAGGT CGACGTGCCG AACCCCGACC TCACCCTGCG GCCGGGCCTC
TATGTCTACG TGACCCTGGC GATCCCCCGC ACCGGCGGCG CCACGGTGGC GGTACCGGCC
GAGGCCCTGG TGTTCAACCA GTCCGGCACC CGCGTCGCCG TCGCCAGCGA GGACGACCGC
GTGCGTTGGG TTGAGGTCCA CGTCGCCCGC GACAAGGGCA CGGTGGTCGA GGTGGACAAG
GGGCTCTCGG GCGGCGAGCG CCTCGTGCTG AGCCCCCCGG CCGATCTCAA GGACGGCGGC
CGCATCGCCC CCCAAGCGCC GAAATCGGAC AAGCCGATGC AAGCCGCGCA GCGTTGA
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| Protein sequence | MSDDARPIRP EDSPVTDGED KKIPPPPGKG GFVWAGLIAL GLLAYGGYGH WQRAARAEST
RARQMEFVPK VRTEEAKRLD GPIELTLPGQ TEPFATARIY PRATGYIAER HVDLGSRVRK
GDVLLRIAAP DLDQQLAQAE AQLGQLEAQL LRARAMVDQA KANTNLAQAT NSRTSTLAGQ
GWASKQNADN TQAGVLAQQA NLASAEADVK VAQANIKAQQ ATVGRLKALT GFEIVTAPFD
GVITTRNVDV GDLVQADAGS GSPLLSMDRD DVLRISVNVP QNAAVGVQPG IAAQIKVPQM
PDRSFAGVVE RSSVALLASS RTLTTQVDVP NPDLTLRPGL YVYVTLAIPR TGGATVAVPA
EALVFNQSGT RVAVASEDDR VRWVEVHVAR DKGTVVEVDK GLSGGERLVL SPPADLKDGG
RIAPQAPKSD KPMQAAQR
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