Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3694 |
Symbol | |
ID | 5831604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4088925 |
End bp | 4091675 |
Gene Length | 2751 bp |
Protein Length | 916 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641369486 |
Product | lipopolysaccharide biosynthesis protein-like protein |
Protein accession | YP_001641141 |
Protein GI | 163853098 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGTTTC AGATGACCAA GAAGAGCTTC AACATGAGAT TTCTAAAGAA AATCACATAC CACAAGATGA GAAAATACAG GAAACCTTAC AAAATTATAA AGCCCTATTT CGATGTGAAA TTTTACTTGC AAGAAAATCC CGACGTTGGT GCGAGCAACC AAAATCCCAT CCTTCACTAT TTAGAGCACG GAAGCAGGGA AGGACGTCGT CCCAATCTAG ATTTTGACAC GCAGTTTTAT AAGCAGAAGT ATGTAGCTGA GATTGGAGAC ACCGAACCAT TTCTATACTA TATTATGAGC GGCAAGGGCA AAGGTCACGC GACCTCCGAT GGCAGCCCTT ATGTCAGCTA CCGAGCGAGG AAAGATTTTC CGGATTATCA ACTCGTCGCC GAGGAATTTG ATACCGAATA CTATTTAAAT GAAAATCGAG ACATACACGA TTCGAAGGTA GACCCTATAT CGCACTATTT GCAACACGGA GAAAGAGAAG GCCGGCGCCC TATTCCTGAT TTCAATCCGA CATTTTACGC TCAAGAGTAC TCGTCGGAAA TTGGTGAGAT GGGGCCTTTC ATTCACTACA TTAGGTACGG CAGAAAAAAA GGCTACAAAG GAGCCCGTGA GGAGTATTAT TACAGCAATC AACTCGTCTA CCCGAATGGA GTAGTGCCAT CCAGACGTCC ACGCAACGAG AATGACTACG CATTTTCGAT CCCTCTTCCA GAGCGGTTGC GGAGCCACCC CTACAAAAAG GCGGCCGCAA TTGTTCACGG CTTTTACCCC GAGCTGATGG AAGAAATATT AATATATTTG GGCAAGTCTA ATTTTCCAAT TGATATATAT GTATCGACGG ACGATAGTAA AAAAGCTGAA CAAATTATAT CAATGGGGAA AAAGTATCAT AACGGACAGC TCGATGTCCG GATCATTTCG AATCGGGGTC GAGATATTGG TCCGATGCTT ACAGGTTTCA GCGATGTGTT TGATAACTAC GAGGCGTTTT TACACATTCA TACCAAAAAA TCACCACACG GGGGTGATGG TTTGAGCTCG TGGCGTGATT ACCTTTTTAA AAATTTGATA GGTTCTGCAG AAATTATAGA TAGCAATCTC CATATTCTCG GGACCCGCAA TGTCGGCTTT GTATACCCGC AACATTTATA CGCTCTGAGG GGTATACTCA ATTGGGGATA TAATTTCGAT ACCGTCTCAT CTTTGCTTCG CAGGGTCGGC GTCCGCCTGA GCAAAGATAT GGTGTTAGAA TTTCCCTCCG GATCCATGTT TTGGGCCAGA ACGGCCGCCC TTCATGGGCT ACTGTCACTC GATCTGAAAC TGGAGGACTT CGACAATGAA GCTGGCCAAG TTGATGGAAC CTTAGGCCAC GCGATTGAGC GCTCCTTCTT GTATTTCGCC GAAACCTCCG GCTACTCTTG GGCAAAGGTA ATTCATGAGT CTACCGAGTA CCCGCACAAA CATTGCGTCA TCCCGATCAG CAGCGAAGAA GAGCTTGCTC GTCGGTTCAA CGACGTCTAT CGGCCGCTCC TGACTCTATC TGTGACCGGC GAGTATCCTC TCAACCGTGC AATCCCAACT TGCCGCGAGT TGCTGTTTAC TCCCTCCTTT CTAACTAAGA AGCGAGTCAT CTTACTGGTT CCGTCGGTCA ATCCGAGGCA GACGTTCGGC GGCATTGCGA CTGCTTTGAA GATCTTCCGA GATATGATTC GACGAGCTGG TCCAGACGTC GATTTCGCAA TTTTGGCGAC CGATGCGGCT ATAGAGCCGG AAGCATCAAG CATTCTTTCA GAGTTCACTC ATAAGCCGTT TATGAGCGAA GAAGATAATG CAAGGCTCAG TCTCATAGAC GTGTCATCGC GGACAACCGG ACGTTTTCCA ATCAGGAAAA ATGACGTCTT CTTTGCTACG GCGTGGTGGA CAGCACGAAT CGCGCAATCA GGGCAAGATT TTCAAAAAAT TTACTTCCAT CAATTTAAAA AATTCATTTA CTTGATACAA GATTTCGAGC CAAATTTCTA CGGCTGGGGT ACGATGTACG CGCTGGCCGA AGCGACATAC AAAGACAGTA GTAAATTTTA TCCAGTCATA AATTCTGAAG AACTTTTTAG ATTTTTTCGT TCGGATGATT ACAATATGGC CGATGCAGTG TGCTTGCCAT ATCGGATTAA CGACCGGATC AATCTATTGC TGAATCCGCG CCCGAGAGAA AAGGTGCTGA TGTTTTACGG CCGCCCTTCA GTACATCGTA ACCTGTTTGA AATCATATGT AACGCCCTAG TTTTGTGGCA AAATAGAAAC CCGGTCTCCT CTTCTTCTTG GAGAATTATA TCGCTTGGTG AGGAATACCC GAAGGAATGG CTGAATCCGA TTCAGAATGT TGATGTCCTC GGAAAATTGA CGCTTGAGCA GTATTCCTAT TGGCTAAGTA GATCAAGCAT TGGTGTTTCG TTAATGCTGT CACCCCACCC GAGCTATCCA CCGTTGGAGA TGGCAGAGGC AGGGCTCATG ACGATTACGA ACGACTATGC CTTCAAATCG ATGGGCAAGA GGTTCGATTT ACTGTCGCTT CCGTATGTGA CTGAGGAGAC ATTGGCTGAT TGCATCGAAG CATGCGTGAG CAGGTATGAG TCTGGAGACT ATAGCATAAA TACCGGTCGA TCTAAGCCAA AGATCGGAAC GCATGAGGAT GTCACATATT TCACGATTGA TAAATTAGTC GATGAATTTG AGCTGAATTG A
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Protein sequence | MMFQMTKKSF NMRFLKKITY HKMRKYRKPY KIIKPYFDVK FYLQENPDVG ASNQNPILHY LEHGSREGRR PNLDFDTQFY KQKYVAEIGD TEPFLYYIMS GKGKGHATSD GSPYVSYRAR KDFPDYQLVA EEFDTEYYLN ENRDIHDSKV DPISHYLQHG EREGRRPIPD FNPTFYAQEY SSEIGEMGPF IHYIRYGRKK GYKGAREEYY YSNQLVYPNG VVPSRRPRNE NDYAFSIPLP ERLRSHPYKK AAAIVHGFYP ELMEEILIYL GKSNFPIDIY VSTDDSKKAE QIISMGKKYH NGQLDVRIIS NRGRDIGPML TGFSDVFDNY EAFLHIHTKK SPHGGDGLSS WRDYLFKNLI GSAEIIDSNL HILGTRNVGF VYPQHLYALR GILNWGYNFD TVSSLLRRVG VRLSKDMVLE FPSGSMFWAR TAALHGLLSL DLKLEDFDNE AGQVDGTLGH AIERSFLYFA ETSGYSWAKV IHESTEYPHK HCVIPISSEE ELARRFNDVY RPLLTLSVTG EYPLNRAIPT CRELLFTPSF LTKKRVILLV PSVNPRQTFG GIATALKIFR DMIRRAGPDV DFAILATDAA IEPEASSILS EFTHKPFMSE EDNARLSLID VSSRTTGRFP IRKNDVFFAT AWWTARIAQS GQDFQKIYFH QFKKFIYLIQ DFEPNFYGWG TMYALAEATY KDSSKFYPVI NSEELFRFFR SDDYNMADAV CLPYRINDRI NLLLNPRPRE KVLMFYGRPS VHRNLFEIIC NALVLWQNRN PVSSSSWRII SLGEEYPKEW LNPIQNVDVL GKLTLEQYSY WLSRSSIGVS LMLSPHPSYP PLEMAEAGLM TITNDYAFKS MGKRFDLLSL PYVTEETLAD CIEACVSRYE SGDYSINTGR SKPKIGTHED VTYFTIDKLV DEFELN
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