Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3532 |
Symbol | |
ID | 5834763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3910145 |
End bp | 3911074 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641369329 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001640986 |
Protein GI | 163852943 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.462333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCTC CTGTTGTTGG GATCGATGTG GCCCGTGACC GCCTCGATAT TCATGTTCAT CCCTCTGGAG CGAACTTCGC CGTTGATCGT ACGACCGAGG GTGTGGAGCA GCTGTGCGAA CGCCTCCGGC CCCTGAAGCC GAAGCTCGTC GTCCTGGAGG CAACCGGCGG TTTGGAAGCC ATGGTGGCAC GTGCTCTCAC CACCTGGAGG CTACCAGCCG TGATCGTGAA CCCAGCACAG GTCCGTGCTT TCGCTCACGC CTTGGGCCAA CGCGCCAAGA CCGACCGCAT CGACGCCACC GTGATCGCCC GGTTCGCGGC GGCCACCAAC CCACCCGTTC GCGCTCGGGC CGATGCCGAG ACTCAGGCCT TGGCTGATCT CGTCACAAGA CGCCGTCAGA TCGTAGGACT GATCGCGTCC GAGCGGCAGC GAGCGAGCCA AGCTCCACCG TGCATTCGAG ACAGCGTCCG GCGCGTCATA GAGGCGTTGG AGCAGGAGCA GAGTGTGATC GACCGCTCGA TCGATGCAGA GGTAGACCGG TCGCTTGAAT GGCGCAGGAA GGAGACCCTC CTGACCTCCG TTCCTGGTGT TGGACCGACG ATCGCACGAA CCCTGATCGC GGAGCTGCCT GAGCTTGGAA GCCTCAACCG GAAGCAAGTC GCCGCGCTGG TCGGCTTGGC CCCTTGGACG CGGCAATCCG GTCAGTGGCG AGGGAGGAGC TTCATTGCAG GCGACCGCGC ACCTGTTCGC ACGGCGCTGT TCATGGGGGC CATGGTGGCC AGCCGTCACA ATGCCGCGCT GAAAACCTTC CGGGACCGGC TCATCGCAGC CGGTAAGCCC AAGCTCGTTG CCCTGATTGC CACCGCTCGG AAGCTGATCA CCATCCTCAA CGCCATCCTG AGAGACGGAA CGCCATGGCA ACCCGCTTGA
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Protein sequence | MDAPVVGIDV ARDRLDIHVH PSGANFAVDR TTEGVEQLCE RLRPLKPKLV VLEATGGLEA MVARALTTWR LPAVIVNPAQ VRAFAHALGQ RAKTDRIDAT VIARFAAATN PPVRARADAE TQALADLVTR RRQIVGLIAS ERQRASQAPP CIRDSVRRVI EALEQEQSVI DRSIDAEVDR SLEWRRKETL LTSVPGVGPT IARTLIAELP ELGSLNRKQV AALVGLAPWT RQSGQWRGRS FIAGDRAPVR TALFMGAMVA SRHNAALKTF RDRLIAAGKP KLVALIATAR KLITILNAIL RDGTPWQPA
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