Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3425 |
Symbol | |
ID | 5832352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3801726 |
End bp | 3803021 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641369224 |
Product | Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_001640882 |
Protein GI | 163852839 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.569361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.792047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAGG CCGTCTCTCC CGACCTCGCC GCCGCGCTGA TCGCCGAAAA CTTTTCCCGC GATGCGAGCG GTGTGCTGCG GGTCGGCGGC CTGCCGCTGA CCGAGCTCGC AAAGGATTTC GGCACGCCGC TCTTCGTCTA CGACGCCGAT ACGATGCGCC GGACCTACCG GGCGCTGTGC GCGGCACTCG CCGGCTTCGC GGAGGTGGAT TTTTCGGTCA AGGCGAACCC CAACCCGGCG GTGATCCGCG TCTTCTCTCA GGAGGGCGCG GGGGCCGAGA TCGCCTCCGG CGCCGAGTTC GACGCCGCGA TCAGGGCGGG TGTTCCACCG GAAAAGATCC TGTTCGCCGG CCCAGGCAAG GGTGCGGCCG ACCTCGACCG GGTGATCGGC GGCGGCATCG GCGAAATCCA TCTCGAAAAC CGCGAGGAGA TTGTTCGCGT CGCGGCGGCG GCTGAGCGTC ACGGCGTGCA CGTGCGGGTG GCGCTGCGGG TCAATCCCGG TGCGACCGCT CAGGGCGGGG CGATGCGGAT GGGCGGCAAG CCTTCGCCGT TCGGCTTCGA CGAGGAGGAC ATCGAGGCCG CCATCGACAC CGTGGAGGCC GAACCGCGCT TGCGCCTCAT CGGGCTCCAC CTGTTCGCGG GCACGCAAGG GCTGAAGGCC GACACCCTCC TCGGCCAGTG GGCCTACGGG CTCGGGCTTG CGGCGCGGAT CGCGAACCGA ATCGGGCGGC CGCTGGAGAC GATCGATCTC GGCGGCGGCC TCGGCATCCC GTACTTTTCC GGCGACACCG CCCTCGATCT CGGCGCGATC CGGGCCGGGC TGCCCGACCT GATCGCCACC CTGCGGGCGG ACCCGCGGCT GGCGAGCGCC CGCGTGGTGC TGGAACCCGG CCGCTACCTC ACCGGGCCGG CGGGCGTCTA CGTGGCGCGG GTGCTGGCGG TGAAGGAATC GCGCGGCAGC CGCTTCGTCA TCACCGATGG CGGCATGCAC CATCACCTGG CCGCGAGCGG CAATCTCGGC CAGATCGTCA AGCGCGACTT CCCCCTCGCC GCGGTGACCG ATGCGGGTGG CGAACGCGCG GCGACGGCGG TCGTCGGCCC GCTTTGCACG CCGCTGGACA TGCTGGCCCG CGCCGCTCCC CTGCCGCCGC TGCCCGAGGG CGATCTCGTC GCGGTGCTGC AATCGGGCGC CTACGGGCTC ACCGCGAGCC CGACGGGCTT CCTGAGCCAC CCGACCCCGG CCGAGGTGCT GGTGGACGGG GGCGAGGCCA GGGAGATCCG GGCGCGCGGG CCTTGA
|
Protein sequence | MTQAVSPDLA AALIAENFSR DASGVLRVGG LPLTELAKDF GTPLFVYDAD TMRRTYRALC AALAGFAEVD FSVKANPNPA VIRVFSQEGA GAEIASGAEF DAAIRAGVPP EKILFAGPGK GAADLDRVIG GGIGEIHLEN REEIVRVAAA AERHGVHVRV ALRVNPGATA QGGAMRMGGK PSPFGFDEED IEAAIDTVEA EPRLRLIGLH LFAGTQGLKA DTLLGQWAYG LGLAARIANR IGRPLETIDL GGGLGIPYFS GDTALDLGAI RAGLPDLIAT LRADPRLASA RVVLEPGRYL TGPAGVYVAR VLAVKESRGS RFVITDGGMH HHLAASGNLG QIVKRDFPLA AVTDAGGERA ATAVVGPLCT PLDMLARAAP LPPLPEGDLV AVLQSGAYGL TASPTGFLSH PTPAEVLVDG GEAREIRARG P
|
| |