Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3346 |
Symbol | |
ID | 5834579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3709513 |
End bp | 3710388 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641369146 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001640804 |
Protein GI | 163852761 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.252204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCT CGATGAGCCC GTCGGTGAGC GCCTCAGGAA TCGAGACAGC CGCGCCGGTC CGCGCGCCGC GCGGTCGGCC GGTCCGGCCT GCGCGACCAT CGTCGCTCAG GCGCTTGGCG CTGCGCGGTG TCGCCCTGGC CCTGAGCCTG ATGGCGTGGC ATCTCGCGGC GAGCAGCCGG CTCGATCTCG GCCTCGTCAC CTTCCGCAAC GTGCCGACCC CGGCGGCCGC CGCGCAGGCG GCCTGGGCGC TGGTCCACGC CCCCGCGCTG CCGACCCATC TGGGCGCCAG CCTCGCGCGG GTGCTGTCGG GCTTCCTCGC CGCTTTGGGC GTGGGCGTCG CCCTCGGCCT CGCCATCGGC CGGTCACGGC TCGCCCGCGA CCTGCTGCTG CCGCCGCTCG AAGTGCTGCG CCCGATCCCC GCGGTGGCCT GGATCCCGCT GGCGATCCTG ATGTTTCCGT CCTCCGAGGT CTCGATGGCC TTCATCACCT TCACGGGCGC GCTGTTCCCG ATCCTGCTCA ACACCGTGCA CGGGGTGGAA TCGGTGCATC CCCGGCTTGT CGCCGCCGCC CGCAGCCTCG GCGCGGGCGA TGCCGCGATC CTGCGCGAGG TGATCCTGCC GGGCGCCGCG CCCAGCATCG TGACGGGGGC GGCGATCGGC ATGGGCACGG CGTGGTTCTG CCTCGTGACC GCCGAGATGA TCTCCGGCCA GTACGGGATC GGCTACTTCA CCTGGGAATC CTATACGCTG CAGAACTACG ACGACATCGT CGTCGGCATG CTGCTGATCG GCCTCCTCGG GATGGGATCG AGCCTCGTCG TCCGCTGGCT CGGCGACCGG GCGACGCCCT GGGTCGGCGC GGGAGGCCAG CGATGA
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Protein sequence | MSPSMSPSVS ASGIETAAPV RAPRGRPVRP ARPSSLRRLA LRGVALALSL MAWHLAASSR LDLGLVTFRN VPTPAAAAQA AWALVHAPAL PTHLGASLAR VLSGFLAALG VGVALGLAIG RSRLARDLLL PPLEVLRPIP AVAWIPLAIL MFPSSEVSMA FITFTGALFP ILLNTVHGVE SVHPRLVAAA RSLGAGDAAI LREVILPGAA PSIVTGAAIG MGTAWFCLVT AEMISGQYGI GYFTWESYTL QNYDDIVVGM LLIGLLGMGS SLVVRWLGDR ATPWVGAGGQ R
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