Gene Mext_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3346 
Symbol 
ID5834579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3709513 
End bp3710388 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content72% 
IMG OID641369146 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001640804 
Protein GI163852761 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.252204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCT CGATGAGCCC GTCGGTGAGC GCCTCAGGAA TCGAGACAGC CGCGCCGGTC 
CGCGCGCCGC GCGGTCGGCC GGTCCGGCCT GCGCGACCAT CGTCGCTCAG GCGCTTGGCG
CTGCGCGGTG TCGCCCTGGC CCTGAGCCTG ATGGCGTGGC ATCTCGCGGC GAGCAGCCGG
CTCGATCTCG GCCTCGTCAC CTTCCGCAAC GTGCCGACCC CGGCGGCCGC CGCGCAGGCG
GCCTGGGCGC TGGTCCACGC CCCCGCGCTG CCGACCCATC TGGGCGCCAG CCTCGCGCGG
GTGCTGTCGG GCTTCCTCGC CGCTTTGGGC GTGGGCGTCG CCCTCGGCCT CGCCATCGGC
CGGTCACGGC TCGCCCGCGA CCTGCTGCTG CCGCCGCTCG AAGTGCTGCG CCCGATCCCC
GCGGTGGCCT GGATCCCGCT GGCGATCCTG ATGTTTCCGT CCTCCGAGGT CTCGATGGCC
TTCATCACCT TCACGGGCGC GCTGTTCCCG ATCCTGCTCA ACACCGTGCA CGGGGTGGAA
TCGGTGCATC CCCGGCTTGT CGCCGCCGCC CGCAGCCTCG GCGCGGGCGA TGCCGCGATC
CTGCGCGAGG TGATCCTGCC GGGCGCCGCG CCCAGCATCG TGACGGGGGC GGCGATCGGC
ATGGGCACGG CGTGGTTCTG CCTCGTGACC GCCGAGATGA TCTCCGGCCA GTACGGGATC
GGCTACTTCA CCTGGGAATC CTATACGCTG CAGAACTACG ACGACATCGT CGTCGGCATG
CTGCTGATCG GCCTCCTCGG GATGGGATCG AGCCTCGTCG TCCGCTGGCT CGGCGACCGG
GCGACGCCCT GGGTCGGCGC GGGAGGCCAG CGATGA
 
Protein sequence
MSPSMSPSVS ASGIETAAPV RAPRGRPVRP ARPSSLRRLA LRGVALALSL MAWHLAASSR 
LDLGLVTFRN VPTPAAAAQA AWALVHAPAL PTHLGASLAR VLSGFLAALG VGVALGLAIG
RSRLARDLLL PPLEVLRPIP AVAWIPLAIL MFPSSEVSMA FITFTGALFP ILLNTVHGVE
SVHPRLVAAA RSLGAGDAAI LREVILPGAA PSIVTGAAIG MGTAWFCLVT AEMISGQYGI
GYFTWESYTL QNYDDIVVGM LLIGLLGMGS SLVVRWLGDR ATPWVGAGGQ R