| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3272 |
|---|
| Symbol | |
|---|
| ID | 5833852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3633393 |
|---|
| End bp | 3634574 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641369072 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_001640730 |
|---|
| Protein GI | 163852687 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.657687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGATCAC CCCGCGCCGC CGTCATCCTC GCGCTCGCGC TGCTGGCGGG GCCGGCCCGG
GCGCAGGATG GCGACTTCTC CGGCTTCGTC GCGTCGCTGC GCCCCGACGC CACGGCCCGC
GGCATCTCGC AGAAGACCTT CGACGCGGCG TTTGCCGGCG TGCAAGCGCC GGATCCGGAC
GTCGTCGCCC GCACTCGCCG CCAGAGCGAG TTCAGCCGGC CGGTCTGGGA CTACCTCGTC
GGCGCGGTCT CGGGCGCCCG CATCACCCGG GGGCAGGCGC AGGGCAAGCG GCTCGCGGCC
ACCCTCGCCG CCATCGAGGC GAAGACCGGG GTGCCGCGCT CGGTCGTGCT GGCCTTCTGG
GGGGTCGAGT CGGATTTCGG CGCCAGCGCC GGCTCTTTAC CGACGGCCCG CGCGCTGGCG
AGCCTCGCTT ACGCCCGGCA TCGCGGAACC CTGTTTCGCG ACGAGCTGCT GGCCGCCCTT
CAAATCCTCG AGAACGGCGA TATCGAGCCG GCGCGGATGG TCGGCTCCTG GGCCGGGGCC
ATGGGGCAGG TGCAGTTCCT GCCCTCGGTC TACCTACGGG AGGCGGTCGA TTTCGACGGC
GACGGGCGGC GCGACATCTG GCGCTCCGAG GCCGATGCGC TGGCCTCCAT CGCGCATTAC
CTGCAATCGC TCGGCTGGAA GCCCGGCCTG TCCTGGGGCT ACGAGGTCAG CCTGCCGAAG
GATTTCGACC TGACCCGCTA CCGCGGCCCG CTCGCCGACT TCGCCGCCCG CGGGGTGCGC
CGCACCGACG GCAAACCCTT GCCGACAGGC GGCGAGGCCA GCCTGTTCCT GCCGGGCGGG
CTCGGGAGCC CGGTCTTCCT CATCACCGAC AATTTCGAGG TGATCCGCGG CTACAACACC
AGCGATTCCT ACGCGCTGGC GGTCGGCCAC CTCGCCGACC GGCTGGCCGG CGGCCCGGCA
CTCGCCGCGC CCTGGCCCAA CGGCGCTGCC CGCCTCGACG GGCCGGGCCT CAAGCGTCTC
CAGGCAGGGC TCGCCGCGAA AGGGCTCTAT GCCGGCGAAC AGGATGGACG CGCCGGCCCG
AAGCTGCGCG AGGCGGTGCG GCAGTACCAG ATCCGCGAGG GCCTGCCCGC CGACGGTTAC
GCCCGGCCCG CACTTCTGGA GCGCTTGGAG GGACGGCCAT AG
|
|---|
| Protein sequence | MRSPRAAVIL ALALLAGPAR AQDGDFSGFV ASLRPDATAR GISQKTFDAA FAGVQAPDPD
VVARTRRQSE FSRPVWDYLV GAVSGARITR GQAQGKRLAA TLAAIEAKTG VPRSVVLAFW
GVESDFGASA GSLPTARALA SLAYARHRGT LFRDELLAAL QILENGDIEP ARMVGSWAGA
MGQVQFLPSV YLREAVDFDG DGRRDIWRSE ADALASIAHY LQSLGWKPGL SWGYEVSLPK
DFDLTRYRGP LADFAARGVR RTDGKPLPTG GEASLFLPGG LGSPVFLITD NFEVIRGYNT
SDSYALAVGH LADRLAGGPA LAAPWPNGAA RLDGPGLKRL QAGLAAKGLY AGEQDGRAGP
KLREAVRQYQ IREGLPADGY ARPALLERLE GRP
|
|---|
| |