Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2928 |
Symbol | |
ID | 5831399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3272111 |
End bp | 3272944 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641368728 |
Product | periplasmic binding protein |
Protein accession | YP_001640388 |
Protein GI | 163852345 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.129419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGC GCCGTGCCCT CGCCCTGCTG CTGACCTTCC TGCCGAACGC ATCTTTCGCC GCGGCGATGC CGACGCGCGT CGTCTCGATG AACCTGTGCG CGGACGAACT GGTCCTGCGC CTCGCCGACC GGGCGCAGGT GGCGGGAATC ACCGGTTTCG CCCGCGATCC CCGCGGCTCA CTGGTGGCGG ACAGGGCCGA GGGGCTGCCG GTGATCCGCG GCCTCTCGGA GGAGATCGTG GCATTGCGGC CCGGCCTCGT CGTGGCGGGC GCGTTCACCA CGCGGACCAC CGTGCCCATG CTGAAGCGCG CCGGCTTCCC TGTGCTCGAA CTCGACGCGC CGGCCGATCT CGACGGCGTG CGCGCGCAGA TCCGCACCGT GGCAGCCGCC CTGGGCCATG CGGAGCGCGG CGACGCGATG GTCGCGGATC TCGATGCGCG GCTTGCCGCG GTCACGCCGT CGGAAAAGCC GCTGCGCGCC CTGGTGATGC ACCCGAACGC CTTCACCGTG GCGCCCGGCA GCCTCGGCGA TGCGCTGATC CGTGCCGCCG GGCTCGTCAA CGTCGCCGCA GAGATCGGCC GCGACCGGTT CGGACAGGTG CCGCTAGAGG CCGCAGCCCT GGCGAACCCC GATTTCATTG TCCTGGACGA GAGTGAGCCC GGCACTCCCT CGCTCGCCGA TACGCTGCTG CACCATCCGG TCCTCGTCGC GCTCCGGCAA CGGGGCCGCG TCGTCTCGAT CCCGAACCGG TTGTGGACCT GCCCCGGCCC GCAGGTCGCC GAGGTGGTGG CGCGCCTCGC CGAGGCGACT CGGCAGAGGG CAGAGCGGCC GTGA
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Protein sequence | MRLRRALALL LTFLPNASFA AAMPTRVVSM NLCADELVLR LADRAQVAGI TGFARDPRGS LVADRAEGLP VIRGLSEEIV ALRPGLVVAG AFTTRTTVPM LKRAGFPVLE LDAPADLDGV RAQIRTVAAA LGHAERGDAM VADLDARLAA VTPSEKPLRA LVMHPNAFTV APGSLGDALI RAAGLVNVAA EIGRDRFGQV PLEAAALANP DFIVLDESEP GTPSLADTLL HHPVLVALRQ RGRVVSIPNR LWTCPGPQVA EVVARLAEAT RQRAERP
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