Gene Mext_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2928 
Symbol 
ID5831399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3272111 
End bp3272944 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content73% 
IMG OID641368728 
Productperiplasmic binding protein 
Protein accessionYP_001640388 
Protein GI163852345 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.129419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGC GCCGTGCCCT CGCCCTGCTG CTGACCTTCC TGCCGAACGC ATCTTTCGCC 
GCGGCGATGC CGACGCGCGT CGTCTCGATG AACCTGTGCG CGGACGAACT GGTCCTGCGC
CTCGCCGACC GGGCGCAGGT GGCGGGAATC ACCGGTTTCG CCCGCGATCC CCGCGGCTCA
CTGGTGGCGG ACAGGGCCGA GGGGCTGCCG GTGATCCGCG GCCTCTCGGA GGAGATCGTG
GCATTGCGGC CCGGCCTCGT CGTGGCGGGC GCGTTCACCA CGCGGACCAC CGTGCCCATG
CTGAAGCGCG CCGGCTTCCC TGTGCTCGAA CTCGACGCGC CGGCCGATCT CGACGGCGTG
CGCGCGCAGA TCCGCACCGT GGCAGCCGCC CTGGGCCATG CGGAGCGCGG CGACGCGATG
GTCGCGGATC TCGATGCGCG GCTTGCCGCG GTCACGCCGT CGGAAAAGCC GCTGCGCGCC
CTGGTGATGC ACCCGAACGC CTTCACCGTG GCGCCCGGCA GCCTCGGCGA TGCGCTGATC
CGTGCCGCCG GGCTCGTCAA CGTCGCCGCA GAGATCGGCC GCGACCGGTT CGGACAGGTG
CCGCTAGAGG CCGCAGCCCT GGCGAACCCC GATTTCATTG TCCTGGACGA GAGTGAGCCC
GGCACTCCCT CGCTCGCCGA TACGCTGCTG CACCATCCGG TCCTCGTCGC GCTCCGGCAA
CGGGGCCGCG TCGTCTCGAT CCCGAACCGG TTGTGGACCT GCCCCGGCCC GCAGGTCGCC
GAGGTGGTGG CGCGCCTCGC CGAGGCGACT CGGCAGAGGG CAGAGCGGCC GTGA
 
Protein sequence
MRLRRALALL LTFLPNASFA AAMPTRVVSM NLCADELVLR LADRAQVAGI TGFARDPRGS 
LVADRAEGLP VIRGLSEEIV ALRPGLVVAG AFTTRTTVPM LKRAGFPVLE LDAPADLDGV
RAQIRTVAAA LGHAERGDAM VADLDARLAA VTPSEKPLRA LVMHPNAFTV APGSLGDALI
RAAGLVNVAA EIGRDRFGQV PLEAAALANP DFIVLDESEP GTPSLADTLL HHPVLVALRQ
RGRVVSIPNR LWTCPGPQVA EVVARLAEAT RQRAERP