Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2561 |
Symbol | |
ID | 5834965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2872284 |
End bp | 2874824 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641368362 |
Product | PAS sensor protein |
Protein accession | YP_001640026 |
Protein GI | 163851983 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.218837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.950665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACC GCGCAGTGCA GGCTTCCTAT CCGGGCGACG ATGCGGCCAT TCGTGACGCG TTGGCGCGCT GGAGAGACGA CGCATCGATC GCGCATCTCG TTCGCGAGGG CAGCGCTCTG CTCGTTCTCG ACGAGGCAGC CGAACGCATC CTCTACGCCG CCGGTGCGGC GCTCCCGCTG CGGGCAGGCG TCGCCGGTTC GGACGGCACC GTCCTTCCGG CTCTTCGCCT GTCCGAGCAG ATCCGCCGCG CCGGTGCCCT GGGCACGCGG CCCCGCATGA TCCGCTTGCG CTTCGATCCC CGCGGTGTCG CGCCGCCCGT GGTCGCCCTT GCCGCGCGGG TCGAGATCGA CGACGGGCAT CCGGTCCTGC TCCTCGCCCC GATCGGATCC TTGCCGGCCT TGCGGCCGTT TGACAGCGGG CCGGCCAAGG CCGATCCGCC CCCGGCGGAT GTGGGCTCGG ATGTCGCGAA GCACGAGGCC TCGTCGCCAT CCCCGGTGCT ATCCCCGGCG CCGGAAGTGG AAACGGCGGA ACTGCCGCTC CGTGTGATTT GGCGCAGCGA TGCCGATGGC GTACTGACCC ATGTCTCGCG CACCCATCCC GACCTCGCCG AAGCCCTGTC CGGCCGCTCC TGGGCCATGC TCGCCGCCGA CGGTGTGATC GAGGGCGCGG CGCTGACGGA CGCACTCGCG GGCCGGCGCA CCTTTCGGAC CCTGCCGCTT CTGGTGCGCG GACGTGCCTA CGAGCACGCG CTCGAAGTCT CGGGTGCCCC TGCGGGCCGT TCGACGGACG ACTTCTCCGG GTTCGGCGGC TTCGCGATCC TCGGCGAGCG TCACGCCCGT GTGATGGAGC GTGCGGTCGA GGATGAGGAA GACGGACCGG AGAACCTGCA GGAGGAGCCC CCGGTCGATG AGACGGAGGC CGAAGCCGGC CTGTCGGTGA ACGAGCATGC CGCCTTCCGC GAGGTCGCAC GCGTTCTCGG ATTGCGGTTT GCCCCCGACG AAGACGGGGA CGACGCGGCG CCGATGCCCG CACGCCTCGA ATCCGCGCCG AGCGGCTCGG TGATGCCCTT CCCGATTCCG CAGGGCCGCC TTTCGGAGGC CGAGACGCGT GCGCGGCTCG CACTCACCGA GCTGCTCGAA AGCCTCCCCC TCGGCGTGCT CGTCTACCGC GGCAGCGAGA TGTTGTTCGC CAGCCGCACC TTCCTCGATC TCACCGGCTA CGCCGATCTG CCGGCCCTGC GTCAGGCGGG CCTCGCGCAT CTCTTCCGCG GGTTGCCGCC GAGAGATCGG GAGATCATCG GGCCGGTGCC CTTCGCGCGG CCCGAGGGCG GCACGGTGGC GCTTCTCGTC GATCGGGCCG GCCTCGTCTG GGAGGGGGCG CAGGCCGAAA TCTGCCTTGC GCGGGCCATG CCCGCTGCGG GCGATATCCA ACTTCCGGCC ATTCCGGCCA ATGCCGCGCG GCTGCGGGCG GAGAAGGTGC TGGATAGTCT GGAGGACGGC GTCGTCACCC TCGATGCCGA GGGCCGCGTC GTCGGCCTCA ACCCGAGCGC TGCCGAACTC GTCCATGCCC ATCCGAAGGA GGTCGTCGGC GGGCGCTTCG CCGACCTGTT CGCGCCCGAG AGTCTGTCGG CGCTGGAGAC CGCCGTCACC GATTCCCGCC GCTCGGGGAC GAGCGAGGTC CACGGCGTGA CCGTGCGCAC CGGGGCGGCG GCGTTGCGCC TGCGCATCGC CCGGCTGCTC GGGGAGGACG CGCCGGGCTA TTGCGCCAGC TTGCGCGAGA TCCGCGATGA GGACGTGGCG CCTCCGGCTC CGGTCGCGGA ACCCGCGCGG CGGAGCGAGC CGGAGGCGGA GGGTGTCTGG AAGGCCAACG CGCTCGCGCG GGTCAGCCGC GAAATCCGCC CCTCGCTCAA CGCGATTCTC GGCCTTACCG ACATGATGCT GTCCGACCGC TTCGACCGGG CGGATGCGGA GCGCCTCGAG GCCTACTTAC GCGAAGTGCG TCTCTCCGGC GGCCGGATCG CTGGCCTGAT CGACGACTTG CGCGATCTTG CCGAGATTCA GGCCGGCCGC GGCAAGCTCA CCTTTGCCGA CCTTGCGCTG AACGAGCTGG TCGCCTCCTG CATCGCCGCG CAGCAGCCCC AGGCGGCGCG CGACCGCATC GTGCTGCGCA CCAGCCTCGC CCCCAACCTG CCGGCGATGA AGGCGGACGA GCGTTCAATC CGGCAGGCGG CGCTGACCGT GCTCGGAAAC GCGATCCGTG TGACCGAGGC CGGCGGACAG GTGATCGTCT CGACCACGCT CGCCGAGCAG GGAGAGGTCG CCCTGCGTGT GCGCGACACC GGCACCGGCA TGACCGAAGA CGAGCTGATG AGCGCACTCG AGCCGTTCGG GGCCGATCTC GGCGCTGTTC CGGAGGGGGA CGAGAAGGGG TTCGGCCTGA CGCTGACCAA GGCGCTCGTG GAGGCCAATC GCGGACGGTT CCGCATCAGC AGCCGCAAGG ACGAAGGCAC CCTCGTCGAG ATGCTGTTTC CGGCCGCCTG A
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Protein sequence | MSDRAVQASY PGDDAAIRDA LARWRDDASI AHLVREGSAL LVLDEAAERI LYAAGAALPL RAGVAGSDGT VLPALRLSEQ IRRAGALGTR PRMIRLRFDP RGVAPPVVAL AARVEIDDGH PVLLLAPIGS LPALRPFDSG PAKADPPPAD VGSDVAKHEA SSPSPVLSPA PEVETAELPL RVIWRSDADG VLTHVSRTHP DLAEALSGRS WAMLAADGVI EGAALTDALA GRRTFRTLPL LVRGRAYEHA LEVSGAPAGR STDDFSGFGG FAILGERHAR VMERAVEDEE DGPENLQEEP PVDETEAEAG LSVNEHAAFR EVARVLGLRF APDEDGDDAA PMPARLESAP SGSVMPFPIP QGRLSEAETR ARLALTELLE SLPLGVLVYR GSEMLFASRT FLDLTGYADL PALRQAGLAH LFRGLPPRDR EIIGPVPFAR PEGGTVALLV DRAGLVWEGA QAEICLARAM PAAGDIQLPA IPANAARLRA EKVLDSLEDG VVTLDAEGRV VGLNPSAAEL VHAHPKEVVG GRFADLFAPE SLSALETAVT DSRRSGTSEV HGVTVRTGAA ALRLRIARLL GEDAPGYCAS LREIRDEDVA PPAPVAEPAR RSEPEAEGVW KANALARVSR EIRPSLNAIL GLTDMMLSDR FDRADAERLE AYLREVRLSG GRIAGLIDDL RDLAEIQAGR GKLTFADLAL NELVASCIAA QQPQAARDRI VLRTSLAPNL PAMKADERSI RQAALTVLGN AIRVTEAGGQ VIVSTTLAEQ GEVALRVRDT GTGMTEDELM SALEPFGADL GAVPEGDEKG FGLTLTKALV EANRGRFRIS SRKDEGTLVE MLFPAA
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