| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2010 |
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| Symbol | |
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| ID | 5831205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 2241611 |
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| End bp | 2243722 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641367810 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001639479 |
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| Protein GI | 163851436 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.10211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAAGG CGCGCGCGGG GATAATCGCG AAACAGGGGG CGGTCTCGGC AGGGCTGGCC
GTCATCCTCG GCGTTCACGC CGGCGCCGGC ATGGCCGCAG ACCTCGCGGA ACGCGCACGG
CCCCGCTTCA TCGATTGGTC CGGCTTCTAT GCCGGGGTGC AGGGCAGCGC GGGCGCTTCC
TTCGGCAACT ACGATTTCGG CCCGACCACC ATCGGCTCGC GCCGCGTTCG GTCGATCTCG
ACGGGCGATG CCACCGGCAG CCGCGATCTC GGCGGCGATG CCACCACCGC AGTCGGCGGC
GCCTTCGCCG GCTGGAATTG GCAGGACGGG GCGCTTGTCT ACGGCATCGA GGCCGACCTC
GTCGGAGCCA ATCTCAAGCG CGGCGCGCGC TCCGATGCGA CGGGCTTCGG CTATGAGGGG
ATCGATCCGC CCTTCGCCTT GATCCGCGAG AAGACGGACG TGTTCGGGGC CGCCCGCGCC
CGGCTCGGCT ACGCCTTCGG CAACAACCTG ATCTACGCGA CCGCCGGTCT CACGGGCGCC
AACGGCCGGG TGCTCGCCAC CTATCCGGAT CTGGCCGGCG GCCCGACGGC CACGGCCACG
CGCAATGTCT CCTATCTCGG CTTCACGCTC GGCGCGGGCG TGCAGTTCGC GGTCGATCCG
CATCTCTCAC TCGGAATCGA CTACCGCTAC AGCGACCTCG GCGAGAGCGG TCGCTTCGGC
CTCGGCACGC TGCCGGGCCC GGACGGCGGG CCGGTGACAA CCCGCACCAG CTTCGTCTCC
AACAAGATGA TGGCCCGGCT GATCTGGCAC CCTCAGGCGC TGACGCTGGT GCCGGAGGAG
GAAGACGAAA CCCCGAAGGA CGCTCGCTTC TCGCTGCACG GCCAGACCAC TTTCGTGAAC
CAGGGCGTGA CGGGATTCCG CGCGCCCTAT CGCGGGCCGC AGAGCCTCGT ACCCGATCAA
GCGCAGGCGA CGACGACCGC GACGCTGTTC CTCGGCCTCA AGCTCTTCGA GGGCACGGAA
CTCTACTACA ACCCGGAATT CAGCCAGGGC TTCGGCCTGT CGCGCACATT GGGCGTGGCC
GGTTTCGTCA ACGGCGAAGC GCAGAAGGCG GGTGCGCCGT TCCCGAAGCT GCGCTCGAAC
CGCTACTTCG TCCGCCAGAC CTTCGGGCTT GGCGGCGAGA CGGAAGAGGT GCCGGACGGG
CCGAATTCCG TCGCCGGCAC GCGCGACGTC GAGCGCATCA CGGTCATCGC TGGCAAGTTC
GCCCTCGGCG ACTTCTTCGA CGGCAACGCC TACGCCCACG ACCCGCGGGT GGATTTCATG
AACTGGGGCC TGTGGGCCGC GGCCGCCTGG GACTTCCCGG CCAACCTCCC CGGCTTCACG
CAAGGCGTGA TGGTCGAGTA CAACCGGGCG GAATTTGCGA TCCGCGCCGC CTACACGCAG
GTGCCCAAGG AGCCGTCCTC CGACGTGCTA GACCCGCGGG TGTTCGAGCG GGCCGGCGCC
GTCATCGAGT TCGAGGAGCG CCACACGCTG CCCGTGCTGG ACCAGCCGGG CCGCTTGCGC
CTCGGCCTGT TCTCGAATGT CGGCAACACC GCCAACTTCC GGCAGGTCGT GGCGCTGACG
CAGTCCGGCG CCTTGCCCGA CATCAATACG GCGGCCGCAG CGACCCGGGA GCCCCGGCGC
AAGAGCGGCG CCTACGTCAA TCTCGAACAG GCCCTCACCG CGGATCTCGG CCTGTTCGCG
CGGGCGAGCG TCAATGACGG GCGCAACGAG AACCTGAATT TCACCGATAT CGACGGCTCG
ATTTCGGGCG GCCTCTCGCT CAAGGGCGCG GCCTGGGGCC GGCCGCAGGA CACGGTCGGC
GTCGGCGCCG CCGCGAACCG GATCTCGACC GCTCACCGCG CCTACTTCGC CAATGGCGGC
CTCGGGCTCC TGATCGGCGA CGGCCGCCTC GACAACTACG CGCCGGAGCG GGCGGTCGAG
GTCTATTACG CGCTGAACCT CACGAAGGCC GTGACGATGA CCTTCGACTA CCAGCACATC
GAGAACCCGG CCTATAACCG CGACCGGGGC CCGGCCGATT TCTTCGGAAC GCGGCTGCAC
ACGGATTTCT GA
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| Protein sequence | MFKARAGIIA KQGAVSAGLA VILGVHAGAG MAADLAERAR PRFIDWSGFY AGVQGSAGAS
FGNYDFGPTT IGSRRVRSIS TGDATGSRDL GGDATTAVGG AFAGWNWQDG ALVYGIEADL
VGANLKRGAR SDATGFGYEG IDPPFALIRE KTDVFGAARA RLGYAFGNNL IYATAGLTGA
NGRVLATYPD LAGGPTATAT RNVSYLGFTL GAGVQFAVDP HLSLGIDYRY SDLGESGRFG
LGTLPGPDGG PVTTRTSFVS NKMMARLIWH PQALTLVPEE EDETPKDARF SLHGQTTFVN
QGVTGFRAPY RGPQSLVPDQ AQATTTATLF LGLKLFEGTE LYYNPEFSQG FGLSRTLGVA
GFVNGEAQKA GAPFPKLRSN RYFVRQTFGL GGETEEVPDG PNSVAGTRDV ERITVIAGKF
ALGDFFDGNA YAHDPRVDFM NWGLWAAAAW DFPANLPGFT QGVMVEYNRA EFAIRAAYTQ
VPKEPSSDVL DPRVFERAGA VIEFEERHTL PVLDQPGRLR LGLFSNVGNT ANFRQVVALT
QSGALPDINT AAAATREPRR KSGAYVNLEQ ALTADLGLFA RASVNDGRNE NLNFTDIDGS
ISGGLSLKGA AWGRPQDTVG VGAAANRIST AHRAYFANGG LGLLIGDGRL DNYAPERAVE
VYYALNLTKA VTMTFDYQHI ENPAYNRDRG PADFFGTRLH TDF
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