Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1920 |
Symbol | |
ID | 5835152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2138272 |
End bp | 2139024 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641367720 |
Product | TIR protein |
Protein accession | YP_001639390 |
Protein GI | 163851347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.417099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCC GCGCCCGCAC GCACACCGAG AAGCCCGGCC CCACGTCCAA GACGGCGGCC AAGGCGAAGC CTGGACCGCG CTCCCCGGCC AGGCCGGCGG TCCCGCGCCC GAAGCCGGAG AAGCCCGAGG TCCGGATCTT CGTCTCGTAC TCGCACCGGG ACGCCGACGC CCGCCAGCGG CTGGAGACCC ACCTCGCGCC CCTGAAGCGC GAGGGCGTCA CGACCTGGTT CGACGGCGAC ATGAACGCCG GCGACAAGCT CGACACCGGG ATCGCGCGGG CGCTGCGCAA CGCCCACGTC TTCGTCGGCC TGCTCAGCCC CGACTACCTC GCGAGCAACT ACTGCTGGAA GATCGAGTAC AAGCGCGCCA TGGGCCGCCG CGCGAACGGC ACGATGCGCG TCGTCGCGGT CGTGCTGCGC CCCTGCGACT GGAAATCGAC CACCGCGGCC GGTTTCAAGC TGCTGCCGGA GGACGGCAAG GAGGTCACCC GCTGGCGCAG CGCCGACGAC GCCTTCCTCA ACGTCGCCCA GGGCATCCGG CGCGTGGTCG CCGACGTCCG CAAGACCATG GCCGCGGCGC CACCCAAGCC AGCCCCGAGG AAGCCGGCCG CCTCGAAAGC TGCGGCGCAG CCGCCGACCA AGCCCGGCCC GAAGCCTCGC CAGAAGCCGG GCCCGAAGCC CAACCCAGGT CGCGCAGGCG CAGGAGCGGT CGCAAGGAAG CGCAAGCCGC CGGCCAAGGG GCGCAAACCC TGA
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Protein sequence | MRARARTHTE KPGPTSKTAA KAKPGPRSPA RPAVPRPKPE KPEVRIFVSY SHRDADARQR LETHLAPLKR EGVTTWFDGD MNAGDKLDTG IARALRNAHV FVGLLSPDYL ASNYCWKIEY KRAMGRRANG TMRVVAVVLR PCDWKSTTAA GFKLLPEDGK EVTRWRSADD AFLNVAQGIR RVVADVRKTM AAAPPKPAPR KPAASKAAAQ PPTKPGPKPR QKPGPKPNPG RAGAGAVARK RKPPAKGRKP
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