Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1749 |
Symbol | |
ID | 5835816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 1972640 |
End bp | 1973320 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641367548 |
Product | OmpW family protein |
Protein accession | YP_001639219 |
Protein GI | 163851176 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCGC GATCGAGCCG TCTCGCGGCC GTGTTCGGCG TTCTCGGGAT CGGCCTGCTC GGAATCTCCA CCCCTTCTCA GGCGGCCGAG CCGGCGATGA ATACGGTCTC CGAAGGCGGG TTGACCGCAG GCAGCCTCCT GGTCCGCGGC CGCGTCATCG GCTCCATCCC GGTCGGCCAG TTCTCCCGGG TCGAGCCGAT CGGCGGCCGC GTCATCACCC CGGCCCGCGC CCTGCCGGAT CTCGACGTGA CGTATTTCCT GTCCGATCAT TTCGCGCTGG CCGGTCAGCT CGGCGTGGTC TCGACCAAGA CCTCGATCCG CGGGTCGTTG ATCGGCGACC TGACGATCGG CTCGACCTGG AGCTTCTCCA TGACCGGCGC GGTCCAGTAC CACTTCCTCC CGCACGGTCC CTTCAACCCC TATATCGGCG CGGGTGCGGG CTACACCCAC CCGATCGCCT ACGAGCCGGC CAAGCCCCTC ATCACCGAGA TGAAGGCCGA TCCGCAACTG GGGCCGATGC TTCAGGCCGG CTTCGATTAT CACCTCGGCG GCAACTGGTA CGCCAACATG GAGATCAAGA AGATCTTCCT GCCGCCGCAG GTCTCCCGGA TCGGTTCCGG CACCACCACG GTGCGGCTCG ACATGCTGAT CATCGGCGCG GGCATCGGCT ACCGCTTCTG A
|
Protein sequence | MAARSSRLAA VFGVLGIGLL GISTPSQAAE PAMNTVSEGG LTAGSLLVRG RVIGSIPVGQ FSRVEPIGGR VITPARALPD LDVTYFLSDH FALAGQLGVV STKTSIRGSL IGDLTIGSTW SFSMTGAVQY HFLPHGPFNP YIGAGAGYTH PIAYEPAKPL ITEMKADPQL GPMLQAGFDY HLGGNWYANM EIKKIFLPPQ VSRIGSGTTT VRLDMLIIGA GIGYRF
|
| |