| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1604 |
|---|
| Symbol | |
|---|
| ID | 5833741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1792936 |
|---|
| End bp | 1793988 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641367402 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_001639074 |
|---|
| Protein GI | 163851031 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.200059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCGC CCCGCACCCG ACACCGCCTG TTCCGCGCCG GCTTTCGGGC GATCACTGCC
ATGGGCGCCG ACCGCTGGCT CGCCCCCGCT GCCCGCGGGC GCGGCGTGAT CCTCACCTTC
CACCATGTTC GCCCCGAGCC GGTGCCGGGT TTCGCCCCGA ACGCCCTCTT GTCGATCACC
CCCGCCTTCC TGGAGCGGAC GCTGGCGCTG CTGGCCGCCC GCGGCTTCGA CCTCATCGGC
CTCAACCAAG TCCCCGAGCG GCTCGCGGCC CCGGAAAGCG GAAAACCTTT CGCCGTGCTG
ACCTTCGACG ACGGCTACCG CGACAATGTC GAGCACGCCC GGCCCGTGCT GGCGCGGCAC
GGCGCGCCGT GGACGCTGTT CGTGACGAGC GACTTTGCCG AGGGGCGCGG ACGGCTGTGG
TGGCTCGAAC TGGAGCGGGC CGTGGCCCGG CTCGACGCGG TGCGGCTCGT CTCCGGCCTC
GTCCTGCCGG CCCGCACGGA TGCCGAGAAG ACGGCCGCCT TCGAGACGGT CTATCGCGCC
CTGCGCGCCG GCCCGGAGCC GGTCCTGCTC GACGAGATCG CGCGCCTGTG CCGCGAGGCC
GGGTTCGAGC CGGGCGGGCT CGCCCGCGAA CTCTGCCTGA GCTGGGGGGA ACTGCGCGAT
CTCGCCCGCG ACCCGGCCGT CTGCATCGGC GCGCACACGC TCTCGCACCC GATGCTCGCC
AAGCACGACG CCGCGTTTGC CGAACGGGAG ATGGCCGAGA GCCGCGCGCG GATCGAGGCG
GAGCTGGGCC GCCCCGTGCG CCACCTGTCC TATCCCGTCG GCGATCCGAC CTCGGCCGGG
ACGCGGGAAT TCGACATCGC AAGGAAACTC GGCTTTGCCA CCGCGGTGAC GACCCGGCCG
GGCCATCTGT TCGCAGGGCA CGCGGACCAT GGCCACGCCC TGCCGCGGGT GTCGGTAAAC
GGGCTGCACC AGAGCGACGC GGCTCTGGCC AGTCTTCTCT CCGGCGTGCC GTTCCTGGCC
TGGAACCGCG GGCAGCGGCT CAACGTGGCG TGA
|
|---|
| Protein sequence | MLSPRTRHRL FRAGFRAITA MGADRWLAPA ARGRGVILTF HHVRPEPVPG FAPNALLSIT
PAFLERTLAL LAARGFDLIG LNQVPERLAA PESGKPFAVL TFDDGYRDNV EHARPVLARH
GAPWTLFVTS DFAEGRGRLW WLELERAVAR LDAVRLVSGL VLPARTDAEK TAAFETVYRA
LRAGPEPVLL DEIARLCREA GFEPGGLARE LCLSWGELRD LARDPAVCIG AHTLSHPMLA
KHDAAFAERE MAESRARIEA ELGRPVRHLS YPVGDPTSAG TREFDIARKL GFATAVTTRP
GHLFAGHADH GHALPRVSVN GLHQSDAALA SLLSGVPFLA WNRGQRLNVA
|
|---|
| |