| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1472 |
|---|
| Symbol | |
|---|
| ID | 5835803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1648940 |
|---|
| End bp | 1650457 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641367272 |
|---|
| Product | 5'-nucleotidase |
|---|
| Protein accession | YP_001638944 |
|---|
| Protein GI | 163850901 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.633021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.092078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGA GCCGCCGCGA GACCGTCGTC GGGCTTGGAA CCGGGCTTCT TGGCGCGGGT
CTCCTCGCAG CCGGCACTGG TGCGGCGCTG GCCGGCACGC CGACCTTCAC CCTGCTCCTC
GTCAACGACA TCTACGCGAT GGACGCGGTG GAGGGGCGCG GCGGCTTTGC CCGACTCAAC
GCGGTGGTGA AGGCCGAGCG CGCCCGCGGC GTGCCGCTGC TCTACGCGCA TGCCGGCGAC
AGCTTCTCGC CCTCGCTGAT GTCGGGTTTC GACCGGGGCG CGCATATCGT CGAACTCTTG
AATCTGGCAC CCCCCGACGT GTTCGTGCCG GGCAATCACG AGTTCGATTT CGGCCCCGAA
GTGTTCGCCG AGCGCCGGAG GGAGGCCCAC TTCCCCTTCC TCGCCGCCAA CCTGCGCGGG
GCGGACCGCC AACAACTGCC CGGCCTCGAG GATACGCGGC TGATCGAACT AGGCGGCATC
CGCGTCGGCC TCGTCGGCAT CGCCCTGCAG GCGACGCCGG AAAAATCGCA ATCGGGAAAC
CTGCACTTCG GCCCCGAGAT CGAGACCCTG GCGCGTGAGG CGGACGCCCT GCGCAAGGCC
GGGGCGCAGA TGATCGTCGG GATCGCCCAC ACCGCGCGGG TGACCGACGA CGCGATCGTG
CGGGCGCGCC TCGTCGATAT CCTGCTCTCG GGCCACGACC ACGACCTCGT CGTGCGCGAC
GACGGGCAGA CGGTGATGGT CGAATCGAGC CACGACGCCC ACTACGTCAC CGCGGTCGAT
GTCTTCGTCA CGGCGACGGG CGACGGGCCG GTGCGCTGGC GCGCCGCCTT CCGCATCCAC
GACACCGCCG AGGTGACGCC CGATCCGGAC ACGCTCGCCG CGGTGCGCCG GCTCGGGAGC
GAGCTGTCGC GGGAGCTCGA CGTCGTGATC GGCACGACGC AAGGCGCGCT CGACAGCCGG
ATCGCCTCGG TGCGGGTGCG GGAAGCGAGC TTCGGCGATC TCGTCGCCGA CGCGGTGCGG
GTGGGCACCG AGGCCGAGAT CGGCCTGATG AACGGCGGCG GCATCCGCGG CGACCGGCTC
TACCCGGCGG GCGCCAGCCT GACGCGGCGC GACATCCTCA GCGAACTGCC CTTCGGCAAC
ACCACCGTGC TCGTAGCGAT CGACGGGGCG ACCCTGCGCG AGGCCCTGGA GAACGGGTTT
CGCGATCTCG GCCGGCCGTC CGGCCGGTTC CTTCAACTCT CCGGAATGGT GGTGACGCTC
GACCCGAACG CGCCGCCGGG CCGGCGCGTC GTGTCGGCGA CGGTCGGGGG CGCCCCCCTG
GACGACGCCC GCATCTACCG CGTGGCGGCC AACGACTTCA TGCTGCGCGG CGGCAACGAT
TACGGAATGC TGGCCAAGGG CCGCGTCCTG ATCGGCGGCA CCGATGGGCG GCTGCTCGCC
AACGAGGTGA TGGCCTATAT CCGCACCCAC GCGCCGCTGC CGGCCGAGAC CGGAGGGCGG
ATTCGGCTGC TGCCCTGA
|
|---|
| Protein sequence | MRPSRRETVV GLGTGLLGAG LLAAGTGAAL AGTPTFTLLL VNDIYAMDAV EGRGGFARLN
AVVKAERARG VPLLYAHAGD SFSPSLMSGF DRGAHIVELL NLAPPDVFVP GNHEFDFGPE
VFAERRREAH FPFLAANLRG ADRQQLPGLE DTRLIELGGI RVGLVGIALQ ATPEKSQSGN
LHFGPEIETL AREADALRKA GAQMIVGIAH TARVTDDAIV RARLVDILLS GHDHDLVVRD
DGQTVMVESS HDAHYVTAVD VFVTATGDGP VRWRAAFRIH DTAEVTPDPD TLAAVRRLGS
ELSRELDVVI GTTQGALDSR IASVRVREAS FGDLVADAVR VGTEAEIGLM NGGGIRGDRL
YPAGASLTRR DILSELPFGN TTVLVAIDGA TLREALENGF RDLGRPSGRF LQLSGMVVTL
DPNAPPGRRV VSATVGGAPL DDARIYRVAA NDFMLRGGND YGMLAKGRVL IGGTDGRLLA
NEVMAYIRTH APLPAETGGR IRLLP
|
|---|
| |