Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1449 |
Symbol | fumC |
ID | 5835738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 1620296 |
End bp | 1621837 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641367249 |
Product | fumarate hydratase |
Protein accession | YP_001638921 |
Protein GI | 163850878 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.352432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGCA GGGACATCCT CAAGACCGGA CTGCTCACGT CGATCGGCTT GGCGGCCGGT GCGACAATCC CGAAGGTGGC GGCCGCGGAG ACCGGCAAGG CCGGCGTGCA ACCCGCGGGG ATTCCTGCGA CGGACGGCGG CGAGTGCTTC CGCGTCGAGA AGGACAGCAT GGGTGAGGTG AAGATCCCCT GCGACAAGCT GTGGGGCGCC CAGACGCAGA GGTCGATCGA GAATTTCGAC ATCGGGATCG AGCGGATGCC GCGTGAGCTC GTGTCGAGCT ACGCGATCCT GAAAAAGGCC GCCGCCAACG TCAACTTCGC GGATGGCCGC CTCGGCGAGA CCCAGCACAA GCTCATCGTT CAGGTCTGCG ACGAGATTCT GGCCGGACAG CACGCGGAGA TGTTTCCGCT GCACGTCTGG ATGACGGGCA GCGGCACCCA GTTCAACATG AACGTCAACG AGGTGATCGC GAACCGGTCC AGCCAGATCG CCGGTCAGCC GCTCGGGAGC AAGAATCCCG TGCATCCCAA CGACCACGTC AACATGGCCC AGTCGTCGAA CGACACCTTC CCGACGGCGA TGTACATGGC CGCCGCGATC GCAGTCCGGC AGCGGCTCGC GCCTTCCATC ACCGAGCTGC GGGACAGCAT CGCCGCGAAG GCGGAGGCGT GGAAGGACAT CATCAAGATC GGGCGCACCC ATATGCAGGA TGCCGTCCCG ATCACGCTCG GGCAGGAATG GTCGGGCTAT TCGGGCATGC TGAGCGACAA CCTGGAGCGC TTCGACGACG CGCTGAAGGG CGTGTACCGC CTGGCCCTCG GCGGCACCGC GGTCGGCACC GGCATCAACG CGCAGCCGGG CTTTGCCGAG GCGAGCGCGA AGGAGATCGC GCGGCTGACC GGCCTGCCCT TCGTCACGGC GCCCAACAAG TTCGTGGTGC AAGGCGCGCA CGACGCCATC GTCCACCTGT CCGGCACGCT GCGGACGCTG GCCGGCTCGC TCTACAAGAT CGCCAACGAC ATCCGGCTGC TGTCCTGCGG TCCGCGGGCG GGCCTGGCCG AGCTGATCAT TCCGGAGAAC GAGCCGGGCT CCTCGATCAT GCCGGGCAAG ACGAACCCGA CCCAGGTCGA GGCGCTGACG ATGGTCACCC TTCAGGTGAT GGGCAACGAC GTCAGCACCG GGTTCGGCGG CGCCAGCGGC TCGCTTGAAA TGAACGTCTA CAAGCCGGTG ATGATCTACG ACGTCCTGCA GTCGATCCGG CTGCTGAGCG ACGGCAGCCG CAACTTCCGC AAGCACCTCA TCGAGGGCAC GAAGCCCAAT CACAAGCGGA TCAAGGACTA CGTCGATCGC TCGCTCATGC TGGTGACGGC TTTGGCCCCG ACGATCGGCT ACGACAAGGC GTCGAAGATC GCTCACCTCG CGCACGAGGA GGATCTCAGC CTGCGGGAGG CGGCGCTCAA GCTCGGCTAC GTCTCCGAGG CCGATTACGA CCGGATCGTC GATCCGCGCA AGATGATCGC CCCCTACGTC GCCAAGAAGT AG
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Protein sequence | MERRDILKTG LLTSIGLAAG ATIPKVAAAE TGKAGVQPAG IPATDGGECF RVEKDSMGEV KIPCDKLWGA QTQRSIENFD IGIERMPREL VSSYAILKKA AANVNFADGR LGETQHKLIV QVCDEILAGQ HAEMFPLHVW MTGSGTQFNM NVNEVIANRS SQIAGQPLGS KNPVHPNDHV NMAQSSNDTF PTAMYMAAAI AVRQRLAPSI TELRDSIAAK AEAWKDIIKI GRTHMQDAVP ITLGQEWSGY SGMLSDNLER FDDALKGVYR LALGGTAVGT GINAQPGFAE ASAKEIARLT GLPFVTAPNK FVVQGAHDAI VHLSGTLRTL AGSLYKIAND IRLLSCGPRA GLAELIIPEN EPGSSIMPGK TNPTQVEALT MVTLQVMGND VSTGFGGASG SLEMNVYKPV MIYDVLQSIR LLSDGSRNFR KHLIEGTKPN HKRIKDYVDR SLMLVTALAP TIGYDKASKI AHLAHEEDLS LREAALKLGY VSEADYDRIV DPRKMIAPYV AKK
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