| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1367 |
|---|
| Symbol | |
|---|
| ID | 5831337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1520215 |
|---|
| End bp | 1522710 |
|---|
| Gene Length | 2496 bp |
|---|
| Protein Length | 831 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641367160 |
|---|
| Product | cellulose synthase catalytic subunit (UDP-forming) |
|---|
| Protein accession | YP_001638839 |
|---|
| Protein GI | 163850796 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03030] cellulose synthase catalytic subunit (UDP-forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.393143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0964081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATACGTG CGCTGCGGTG GCTGGCCTGG ATGGGGACGA CGGTTGCCGG CCTCATCCTG
CTGAGCCAAC CGGTCGGGAC GCAGAACCAG CTCGCCATGA GTCTTGCCGC CATGGCGGCG
ATGATCGTGC TGTGGCTGTT CCTCGACGGG CCGCGCACCC GCTTCGTGTT CCTGGCGCTC
GGGAGCCTCG TGGTGCTCCG CTACATCCTG TGGCGGGTCA CCGATACGCT GCCCTCCCCC
GGCGATCCGG TCAGCTTCGG CTTCGGCCTG CTGCTGCTCG TGGGCGAATT GTACTGCGTC
TTCATCCTGT TCGTGAGCCT GATCATCAAC GCCGACCCGC TCAAGCGGGC CCCGCCCCCT
GTCGCGCGCG CGGCCGAGCT GCCGACGGTC GACGTGTTCG TGCCGAGCTA CAACGAGGAC
GCCGCCATCC TGGCGATGAC GCTGGCAGCC GCGCGCCAGA TGAATTACCC GCCCGACAAG
CTTAACGTCT GGCTTCTCGA CGATGGCGGG TCGGACCAGA AATGCGCCGA CCCCAACCCG
GAGAAGGCCA AGGCTGCCCG CGACCGGCGG CGGGAGCTGA CGGTGCTGGC CGAGGAACTC
GGCTGCCGCT ACCTCACCCG CGCCCGCAAC GAGCACGCCA AGGCGGGCAA CCTCAACAAC
GGGCTGGCCT TCGCCAGCGG TGAGATCGTC GTCGTGCTCG ATGCCGACCA CGTCCCGTTC
CGCTCGTTCC TGAGCGAGAC GGTCGGCTAC TTCGCCGAAG ACCCGAAGCT GTTCCTCGTC
CAGACCCCGC ACGCCTTCCT CAACCCCGAT CCGATCGAGC GGAACCTGAA GACCTTCGAG
CGGATGCCGT CGGAGAACGA GATGTTCTAC GCGGTGACGC AGCGCGGGCT CGACAAGTGG
AACGGCTCGT TCTTCTGCGG CTCCGCCGCC TTGCTGCGAC GCACTGCCCT GGACGAGGCC
GGGGGATTCT CCGGCATCAC CATCACCGAG GATTGCGAGA CCGCGTTCGA GCTGCATTCC
CGCGGCTGGA CCAGCGCCTA TGTCGACAAG CCCCTGATCG CCGGTCTCCA GCCCGAGACG
CTCTCGGCCT TCATCGGCCA GCGCTCGCGC TGGTGCCAGG GCATGTTCCA GATCCTGCTC
CTGAAGAACC CCGCTTTGCA GAAGGGGCTC AAGCCGATCC AGAAGATCGC CTACCTCTCG
AGCATGACGT TCTGGTTCTT CCCCGTGCCG CGGCTGATCT TCATGTTCGC GCCGCTCTTG
CACATTTTCT TCGATCTGAA GATCTTCGTT GCCAGCGTCG ATGAATCGAT TGCCTATACG
GCGACCTACA TCGTCATCAA CCTGATGATG CAGAACTACG TCTACGGCAA GTTCCGCTGG
CCCTTCGTCT CGGAACTCTA CGAATACGTT CAGGGCCTCT ATCTGTCGAA GGCCATCGTC
TCGGTGATCT GGTCGCCGCG AAAGCCGACC TTCAACGTCA CCGACAAGGG CATCAGCCTC
GACCACGACC ATCTCTCGTC GGCCTCGCTC CCGTTCTTCG CCGTCTATGG GTTGCTGGCG
GCGGGCTGCG CGGTGGCGAC GTGGCGCTAC CTGTTCGAGC CGGGCGTGAC CAACCTGATG
CTGGTGGTCG GGCTGTGGAA CTTCTTCAAC CTGCTGACCG CGGGCGCGGC GCTCGGGGTC
TGCGCCGAGC GCCGACAGCT GGAGCGGACG CCCTCGCTCG CCATCAACCG GCGCGGCCAG
ATCACCTTGG GCGGCCGGGC CATCGACGTG TCGATCGAGC GCGTCTCGGC CGAGGCCTGC
ACGGTGCGCC TGCCCGCCGC CCTGCTGCCG ACGGGGGGTG GACACCGCAA GCTCACCGGC
GCGCTCACCG TCGTCCCGGT GGCGGGCGCG CGCCCGGCCG GCGCCCTGCC GGTGACCCTG
GAGCGGATCG ACCGCACCAA GGACGAGGCC TTCGCCCGCC TGAGCTTCGG CCGCCTGCGC
CCGCAGGATT ACGTGGCGCT CGCCGGCCTG ATGTACGGCG ACGCGGAGGC GATGCGGCGC
TTCCAGATGC GCCGCCGCCG CCACAAGGAC ATCCTGACCG GCACGCTGCA ATTCATCTGG
TGGGGTCTGT CCGAGCCGTT CCGCGCCGTG CGCTACGCCT TCGCCGCCGA TGCGCGACCG
GCGGTGGCGC CGGTGATCGA CGGCACGTCG CCGATCTACG ATGCGCCGGA ACAGGCGCCG
ACCGGGGCGA ACCTGCCCGA GCCGCTGCTT GCGCCAGCGG TGCCGGCTCA CGCGCTCCAG
GCCGCCCCGC AGGCGCCGAG GGCGCCTGTG CCGGCCGAGG CGCGGAACCC GGTCCCGACG
GCTCAGGCCC CGGCCAACTC CTCTGCCAAC CCTTCGGCCA ACCCCTCTGC CAACCCGCCG
GCCCGCGCCT CGAACGATTG GGTGCGCATG ATGCTCGATT ACGAGAACGA GCGCGCGCTC
GCCGGTCGGA CCGGCCGCGG CACCGGCACG GCATGA
|
|---|
| Protein sequence | MIRALRWLAW MGTTVAGLIL LSQPVGTQNQ LAMSLAAMAA MIVLWLFLDG PRTRFVFLAL
GSLVVLRYIL WRVTDTLPSP GDPVSFGFGL LLLVGELYCV FILFVSLIIN ADPLKRAPPP
VARAAELPTV DVFVPSYNED AAILAMTLAA ARQMNYPPDK LNVWLLDDGG SDQKCADPNP
EKAKAARDRR RELTVLAEEL GCRYLTRARN EHAKAGNLNN GLAFASGEIV VVLDADHVPF
RSFLSETVGY FAEDPKLFLV QTPHAFLNPD PIERNLKTFE RMPSENEMFY AVTQRGLDKW
NGSFFCGSAA LLRRTALDEA GGFSGITITE DCETAFELHS RGWTSAYVDK PLIAGLQPET
LSAFIGQRSR WCQGMFQILL LKNPALQKGL KPIQKIAYLS SMTFWFFPVP RLIFMFAPLL
HIFFDLKIFV ASVDESIAYT ATYIVINLMM QNYVYGKFRW PFVSELYEYV QGLYLSKAIV
SVIWSPRKPT FNVTDKGISL DHDHLSSASL PFFAVYGLLA AGCAVATWRY LFEPGVTNLM
LVVGLWNFFN LLTAGAALGV CAERRQLERT PSLAINRRGQ ITLGGRAIDV SIERVSAEAC
TVRLPAALLP TGGGHRKLTG ALTVVPVAGA RPAGALPVTL ERIDRTKDEA FARLSFGRLR
PQDYVALAGL MYGDAEAMRR FQMRRRRHKD ILTGTLQFIW WGLSEPFRAV RYAFAADARP
AVAPVIDGTS PIYDAPEQAP TGANLPEPLL APAVPAHALQ AAPQAPRAPV PAEARNPVPT
AQAPANSSAN PSANPSANPP ARASNDWVRM MLDYENERAL AGRTGRGTGT A
|
|---|
| |