Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1282 |
Symbol | |
ID | 5835853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1423261 |
End bp | 1424760 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641367074 |
Product | methylmalonate-semialdehyde dehydrogenase |
Protein accession | YP_001638754 |
Protein GI | 163850711 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.24316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCAAG AGATACCGCA CTTCATCGAC GGCGCCCGCG CCCCGGGCCG CTCCGGCCGC ACCGCGCCGG TTTACAATCC GGCCACCGGC GAGGAGACCG GCGCGGTGGC GCTGGCGAGC CGCGACGAGG TCGAGGCCGC GGTGGCGTCG GCCAAGGCCG CCTTCCCGGC CTGGGCCGCC ACGCCGCCCC TGCGCCGCGC GCGCATCCTC AACCGCTTCC TGCGCATCCT CGAGGAGCGC ACCGACGAAC TCGCTGCCGT CATCACCGCC GAGCACGGCA AGGTACTCTC GGACGCCAAG GGCGAGATCC AGCGCGGGGC CGAAGTCGTG GAATTCGCCA CCGGCATCCC CCAGCTTCTG AAGGGCGAGG TGACCGAGAA TGTCGGTACC CGCGTCGATT CCCACTCCCT GCGCCAGCCG CTCGGCGTGG TGGCCGGCAT CACGCCGTTC AACTTCCCCG CCATGGTGCC GATGTGGATG TTTCCCGTGG CGCTCGCCTG CGGCAACTGC TTCGTCCTGA AGCCCTCTGA GCGTGACCCG TCGACCGCTT TGCGGATGGC CGAGTGGCTG ACGGAAGCCG GCCTGCCCGA CGGCGTGTTC CAGGTGGTGC AGGGTGGCAA GGAGGCGGTC GACGCGCTCC TGCACAGCCC CGGCATCAGC GCGGTCAGCT TCGTCGGCTC GACCCCGATC GCCCGCTACA TCTACGCCAC GGCCACCAGC ACCGGGAAGC GCGCCCAGGC GCTGGGCGGC GCCAAGAACC ACATGATCGT CATGCCCGAT GCCGACATGG ATCAGGCGGT CGATGCCCTG ATGGGCGCCG CCTACGGCTC GGCGGGCGAG CGCTGCATGG CGGTCTCGGT GGCGGTGCCG GTCGGCGAGC GGACCGCCGA CGCCCTGATC GAGCGGCTGA TCCCGAAGGT ACGCGCGCTC AAGGTCGGCC CCGGCACCGA CCCCGAGTCC GAGATGGGCC CGCTGGTGAC GCGCCAGCAC TACGAGAAGG TGCGCGGCTA CATCGACCAG GGCGTGGCCG AGGGCGCTGA GCTCCTGGTC GACGGTCGCG ACCTCAAGCT CCAGGGCTAC GAGGGCGGCT ACTTCATCGG CGGCTCGCTG TTCGACCGGG TGACGCCGGA GATGCGGATC TACCGGGAGG AGATCTTCGG GCCGGTCCTG GCCGTGACCC GGGTGCCGGA CTACGCCGCG GCCGCGCAGC TCATCAATGA GCACGAGTTC GGCAACGGCA CCGCGATCTT CACCCGCGAC GGCGACGCGG CGCGGGAATT CGCGCATGCG ATCGAGGTCG GCATGGTCGG CATCAACGTG CCGATCCCGG TGCCGATGGC CTTCCACTCG TTCGGCGGCT GGAAGGCCTC GCTGTTCGGC GACCACCACA TGCACGGGCC GGAGGGCGTG CGCTTCTACA CGCGCCTCAA GACCATCACG ACCCGCTGGC CAACCGGCAT CCGTGCCGGC GCCGACTTCG TGATGCCGAC CATGCAGTAA
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Protein sequence | MPQEIPHFID GARAPGRSGR TAPVYNPATG EETGAVALAS RDEVEAAVAS AKAAFPAWAA TPPLRRARIL NRFLRILEER TDELAAVITA EHGKVLSDAK GEIQRGAEVV EFATGIPQLL KGEVTENVGT RVDSHSLRQP LGVVAGITPF NFPAMVPMWM FPVALACGNC FVLKPSERDP STALRMAEWL TEAGLPDGVF QVVQGGKEAV DALLHSPGIS AVSFVGSTPI ARYIYATATS TGKRAQALGG AKNHMIVMPD ADMDQAVDAL MGAAYGSAGE RCMAVSVAVP VGERTADALI ERLIPKVRAL KVGPGTDPES EMGPLVTRQH YEKVRGYIDQ GVAEGAELLV DGRDLKLQGY EGGYFIGGSL FDRVTPEMRI YREEIFGPVL AVTRVPDYAA AAQLINEHEF GNGTAIFTRD GDAAREFAHA IEVGMVGINV PIPVPMAFHS FGGWKASLFG DHHMHGPEGV RFYTRLKTIT TRWPTGIRAG ADFVMPTMQ
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