Gene Mext_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0613 
Symbol 
ID5834297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp675544 
End bp676710 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content71% 
IMG OID641366396 
Producthypothetical protein 
Protein accessionYP_001638098 
Protein GI163850055 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.112882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCC GCCTTGCACG GCGCACGCTG CTCGCCGGCA CCGCGGCCTT GGCCGCCGCG 
CGGACGATGG CGACGCGGCC GGCCCAGGCT GAAGCAGCCA CCGCGCCGGT CGGCACCCTC
GAACGCGTCG TCGCCGTGCG GGCGCCGACG ACGCCGACCG GGCTGACGCT GTCCGCTGAC
GGCCGGATGT TCCTGTTCAT GCCCCGCTTC GACGAGCGGA CGGTGTTCAC CGCGGGCGAG
GTGTTTCCGG ATGGGCGGGT CGTGCCCTAT CCGAGCGAGG CGGCGAACCG GCCCGATCCG
GCGCGTCCGG CCGAGACGCT GTTCCACGTC CCCAACGGCG TGTTCGATGC AAAGAACCGC
CTCTGGCTGC TCGATGCCGG GCTGATGGCC TCGTCGGGTG AGCCGGTGCC GGGCGCGGCC
AAGCTCGTCT GCATCGATCC GGCGACGAAC GGGATCCTGC GCACGATCCC GCTGCAATCG
GTCGTGACCA AGACCTCCTC GCTCAACGAC CTGCGGGTCG ATGTGAGGCC GGGACGCGAG
GCGGCCTACA TCACCGACCA GGGCCAGACC GGCGCGGGCG CGCTGATTGC GGTCGATCTC
GCGAGCGGCC GCGCGGTGCG GCGGCTCGCC GACCATGCCA GCACGCAATC GGTGCCCGGC
ATCCTCAAGA TCGTCGACGG CCGGGTGCTG CTGAAACGCG AGGCCGACGG TACGACGAGC
CCGATCAAGG GCGGCGCCAA CGGCATCGCG CTGAGCCCGG ATGGCGCACG GCTGTACTAC
ACGCCGCTCA TGAGCCGGCG CCTCTACGCG GTCGAGACCG CCGCCTTGCT CGATGCGGGA
AAGGACGACG CGGCGGTCGC GGAAACGGTG ACGGATCTGG GCGAGAAGGG CCTGACCGGC
GGGCTCGCCG CCGATTCGCG CGACCGGATT TATCTCAGCT TGCAGGAATT CAACGGCATC
GGTCGGCGCG ATCCGGACGG GCGAGTCGAG GTCATCGCCA CCGATCCGCG CCTGATCTGG
CCGGACACGT TCTGGATCAC GGCGGACGGC TGGCTCTACC TGTCATCCGC TCAGGCCAAC
CGCCGCCCCG AACACAACGG CGGCGTCGAC CGGCAGGAGC CGCCCTACGC GATCTTTCGC
ATGCGGATCG ATGCCGGGCC GGCGTGA
 
Protein sequence
MTVRLARRTL LAGTAALAAA RTMATRPAQA EAATAPVGTL ERVVAVRAPT TPTGLTLSAD 
GRMFLFMPRF DERTVFTAGE VFPDGRVVPY PSEAANRPDP ARPAETLFHV PNGVFDAKNR
LWLLDAGLMA SSGEPVPGAA KLVCIDPATN GILRTIPLQS VVTKTSSLND LRVDVRPGRE
AAYITDQGQT GAGALIAVDL ASGRAVRRLA DHASTQSVPG ILKIVDGRVL LKREADGTTS
PIKGGANGIA LSPDGARLYY TPLMSRRLYA VETAALLDAG KDDAAVAETV TDLGEKGLTG
GLAADSRDRI YLSLQEFNGI GRRDPDGRVE VIATDPRLIW PDTFWITADG WLYLSSAQAN
RRPEHNGGVD RQEPPYAIFR MRIDAGPA