Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0209 |
Symbol | |
ID | 5831086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 227486 |
End bp | 228274 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641365994 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001637706 |
Protein GI | 163849663 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.128983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGG GAACCGTGCT GATCACCGGC GCCTCCTCCG GCATCGGCGC CGTCTACGCC GACCGCTTCG CCGGGCGCGG CCACGACCTC ATCCTCGTCG CCCGCAACAA GGCGCGGCTC GACGCCGTCG CCGAGGATCT CACCCGCCGC CACGGCGTGT CGGTTCGGAC CGTCGAGGCC GATCTGACGG ACCGGGCGGG GCTTGCCGCG GTCGAGGCGA TCCTGAAGGA CGAGGCGGAC ATCACGCATC TCGTCAACAA TGCCGGCTTT GGCTCTGCCG CGCCGCTCGC CGCGGCCTCG GTCGATGAGA TGGAGCGGAT GATCGCCATC AACGTCACCG CGCCGATGCG CCTGACCTAC GCGGCGGTGC CGGCTTTCAC GAGCCGCGGA CAGGGCACGA TCATCAACAT CGCCTCGATC GTCGCCATCG GGCCCGAGGT CCTGAACGGC GTCTATGGCG GCTCGAAGTC GTTCGTCCTC GGCTTCAGCC ACGCCCTGCG CAAGGAGCTC GCGGGCACCG GGGTCGCGGT GCAGGTGGTG CTGCCCGGCG CGACCGGAAC CGAGTTCTGG GACGTCGCCG GCCTGCCCGC GAGCAACCTG CCGAAGGAGT GGGTGATGTC GGCCGAGGAT CTGGTCGATG CGGCCCTGGC CGGCCTCGAC CGGGGCGAGT TCGCCACCAT CCCCTCGCTT CAGGACGCGG CCGAATGGGA CGCCTGGGAG GCCGCACGCG CGATCATGCT GCCGCACCTG TCGAGCGCCG TCCCGGCCGC ACGCTACCGC GCAGCTTGA
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Protein sequence | MSQGTVLITG ASSGIGAVYA DRFAGRGHDL ILVARNKARL DAVAEDLTRR HGVSVRTVEA DLTDRAGLAA VEAILKDEAD ITHLVNNAGF GSAAPLAAAS VDEMERMIAI NVTAPMRLTY AAVPAFTSRG QGTIINIASI VAIGPEVLNG VYGGSKSFVL GFSHALRKEL AGTGVAVQVV LPGATGTEFW DVAGLPASNL PKEWVMSAED LVDAALAGLD RGEFATIPSL QDAAEWDAWE AARAIMLPHL SSAVPAARYR AA
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