| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1212 |
|---|
| Symbol | |
|---|
| ID | 5325700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 1235374 |
|---|
| End bp | 1237158 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640786902 |
|---|
| Product | DNA polymerase II small subunit |
|---|
| Protein accession | YP_001323722 |
|---|
| Protein GI | 150399955 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACTA AATTTCTAGA TATTGAGATT ATATTATCCC CTGAATCGTA TGAACGGATG
AATGAACTTG ATAAAAACGA TTTTTCAGAA TTATTTAATA AAGTAGTAGA ATTTAAGAAG
AAAAAAGATG AATTTTTACT TTTAGACTCT CATTTTTTAG ATATTTTTTT AGGGAATAAT
CTAAAGTATA TTTTAGAAAC TTATGGAAAC TTTGATTTTT TAGCTTACTA TACATCAGGC
GATTTTTTAA AATTGGAGAA TAATACTAAG TTTGACACTA ACGATTATGA AGTAAATAAT
ATTGAAAACA ACAACTTAGG GGCATCTAAA AAAGAAAACG TTAAAACTGA AATGGTTATT
TACGACAGGG ATTTTGATAG TGAACTAGAA GTTTTAACTG TTCCAATTAA TGAAAATTTG
CTAAAACTAC AAGAAGAGCG TAAAAAAAGG ATTTTTGAAA TTAAAAGACT GAAAGAAGGC
ATAAATACTC GAATAAAGTA TATTGCAAAG GATATTGAAC CCCAAATTCA TATTTACGAT
GAATATGATG TTACCGGAAA ATCCACGTGT GAAGGGTCGC TTGATGATTT TGTAAAATAT
TTTAAAGACC GGTTTAATAC TATAAAAAAA ATAATAGAGT CAAAATTACA AAAAAAAGCA
TACCCTTTAA ATCAACTTTC AAGGCGTAAA AAAGAAACAG GGGTATTTAT TGCAGGAATA
GTTTCAGATA TAAATTCTAC GAAAAATGGC CACAAGATTG TCGAGATAGA AGATGAAAAC
ACGACTTTTA GGGTACTTTT AATGAAGGAT AAAATTGATA AAGGCGATGT TCCAAACGAT
ATTCTTTTAG ATGAGGTAAT CGCATTTGAA GGAACCCTAA ACGATAAAGG CGATGTAATG
TTTGTCGATA AAGCATTTAG GCCCGATATT ACTCCAAAAA ATCCTCCCAA ATCTTCTGAA
GAAAAGTTAT TTACTGCATT TTTATCCGAT GTTCACATTG GAAGCCATGA ATTTATGGCT
AAAACATTTG GAAAGTTTAT AAAATTTTTA AATGGCGATG TTTCTTCAGG TCTTGAAGAA
AAAATAGTCA GCAGATTAAA ATATATTTCA ATTGCAGGGG ATCTTGTAGA TGGCGTTGGA
ATTTACCCTG GCCAAGAATA CGATCTTTAC GACGTTGATA TTATTTCACA ATATAAAGAA
TTTGCAGCTT ATTTAGAACA GATTCCAGAA CATATAAAAA TAATAGTATC TCCTGGAAAT
CACGATGCTT TAAGGCCTGC AGAGCCTCAA CCGGCATTTG ATGAGTCAAT AACTGACCTT
TTTCCAAAAG AAAATATTAA TTTTATTGGA AACCCAGGAT TAGTAAATAT TCACGGGCTT
GATTTATTAC TGTACCACGG TAGAAGTTTT GATGATGTAA TTGGCCAGAT TTCATCGGCC
CAATATACTG ACCCACCGTC AATAATGCGA GAACTTTTGA AACGAAGGCA TTTATGCCCA
ACATATGGTG GAAGATGTCC GATAGCTCCG GAACATATTG ATTACCTTGC AATACATAAA
GAACCAGATA TATTCCATAC TGGCCACATT CATATAAATG GATATGGGAA TTATCGAGGG
GTTACAATGG TAAATAGCGG TACGTTTCAA GAACAAACTG ATTTTCAGAA AAAAATGGGA
ATCCGGCCGA CTCCCGGAAT TGTGCCAATA TTGGACCTTT CAAAAACAAA AGATCATGTC
ATAGAATGGA ATAATGGAAA AATCGTAGTG GTAAACCAAT ATTAA
|
|---|
| Protein sequence | MITKFLDIEI ILSPESYERM NELDKNDFSE LFNKVVEFKK KKDEFLLLDS HFLDIFLGNN
LKYILETYGN FDFLAYYTSG DFLKLENNTK FDTNDYEVNN IENNNLGASK KENVKTEMVI
YDRDFDSELE VLTVPINENL LKLQEERKKR IFEIKRLKEG INTRIKYIAK DIEPQIHIYD
EYDVTGKSTC EGSLDDFVKY FKDRFNTIKK IIESKLQKKA YPLNQLSRRK KETGVFIAGI
VSDINSTKNG HKIVEIEDEN TTFRVLLMKD KIDKGDVPND ILLDEVIAFE GTLNDKGDVM
FVDKAFRPDI TPKNPPKSSE EKLFTAFLSD VHIGSHEFMA KTFGKFIKFL NGDVSSGLEE
KIVSRLKYIS IAGDLVDGVG IYPGQEYDLY DVDIISQYKE FAAYLEQIPE HIKIIVSPGN
HDALRPAEPQ PAFDESITDL FPKENINFIG NPGLVNIHGL DLLLYHGRSF DDVIGQISSA
QYTDPPSIMR ELLKRRHLCP TYGGRCPIAP EHIDYLAIHK EPDIFHTGHI HINGYGNYRG
VTMVNSGTFQ EQTDFQKKMG IRPTPGIVPI LDLSKTKDHV IEWNNGKIVV VNQY
|
|---|
| |