Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_0673 |
Symbol | |
ID | 5325060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | + |
Start bp | 722920 |
End bp | 725589 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640786341 |
Product | DNA-directed RNA polymerase subunit A' |
Protein accession | YP_001323191 |
Protein GI | 150399424 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.657483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGAT TTGATGTTCC AAAGGAAATC GGAGATATTA CATTTGGATT GCTCTCTCCA GAACAGATAA GGACAATGTC TGTTGCAAAA ATCGTTACAG CAGATACTTA TGATGACGAT GGATATCCAA TTGATGGCGG ACTAATGGAT ACAAGATTAG GTGTTATTGA CCCAGGTTTA GTTTGTAAAA GTTGTAGTGG GAGAGTTGGA ACGTGTCCAG GGCATTTTGG ACATATTGAG CTTTCAAAAT CAGTTATTCA TATTGGTTTT GCAAAAGATA TTTATAAACT TTTAAAAGCA GTTTGTCCAC ACTGCGGTAA AGTTACGGTT ACCGAAATAA AACGGGATGA ATATTTAGAA AAAATGCTAA AACTTGAAGA AGACGGTGGA GACCCATGGA CTCTTTCCGA TGACCTGCTA AAAGAAGCTG CAAAAAGTAG TGTTTGCCCT TCCTGCGGTG AAGTAAAATA TGATATAAAA TATGACAAAC CAACTACCTA CCACCAGTTA GACGGTAAAT CACAAAAACA GCTTACATCA TCAGAAGTAA GGGAAATTTT AGAAAAAATT CCAAATGAAG ACTGTAAACT TCTTGGAATA AATTCAAGAG TTGCAAGACC TGAATACATG GTTTTAACTG TACTTCCAGT CCCCCCGGTA ACGGTTAGGC CCTCTATAAC GCTAGAAAGT GGTGAAAGAA GTGAAGATGA TTTAACCCAC AAGTTAGTTG ATATCATTAG AATTAACCAG CGTTTAGAAG AAAACATCAA CGGTGGTGCT CCAAACTTAA TTATTGAAGA CTTATGGGAT CTTTTACAGT ACCACATAAA TACGTACTTT GATAACGAAG CACCAGGTAT CCCTCCAGCA AGGCACAGAA GTGGAAGGCC ACTTAGAACT CTTGCTCAAA GATTAAAAGG AAAAGAAGGA AGATTTAGAC ACAATTTAGC TGGTAAAAGG GTAAACTTTT CAGCTAGAAC TGTTATTTCA CCAGACCCAA GACTTAGTAT TAATGAAGTT GGAATTCCAG AATTAATTGC AAAAGAACTA ACGGTTCCAG AAAAGGTTAC GCCATATAAC ATTGAAAGAA TCAGAAAATT AATTGAAAAT GGTTCTGATA AACATCCTGG TGTAAACTAC GTAATTAAGA AAGTTAAAAC TAAAGATGGT AAAGAAGAAG AATATAAGAT TAAAATTACT GACACCAACA AAAAAATGTG GGTAGAAAAT ATTGTTGATG GAATGGTCGT TGAAAGACAT TTGGGGGATG GTGACGTCGT TTTATATAAC CGACAGCCAT CTTTACACAG GATGTCTATC ATGGCACACA AAGTAAAAGT TCTCCCATAT AGGACTTTTA GGCACAACCT TTGTGTATGT CCGCCATATA ACGCAGACTT TGACGGTGAC GAAATGAACG TTCACGTTCC ACAGTCTGAG GAAGCAAGAG CGGAAGCTGA AACACTAATG CTTGTTGAAA AACATATTAT TTCCCCAAGA TACGGTGGAC CAATTATCGG TGCAATTCAC GACTTCGTTT CGGGAGCATA TGTTCTTACA AGTTCGAATT TTATAAAAGA TGAAGCATTA ACTCTTCTTA AAAGTTCAGG ATTTGGTTCA GAACTTGGAG AGCCGGACTT TGTTGAAAAT GGAATAGAAT ACTACAGCGG AAAATCATTA TTTAGTAAAA CTCTTCCAAA AGGACTAAAT TTACAGTACA AAGCTAAAGT CTGTAAAAAG TGTGTTCAAT GTAAAAGGGA AGAATGTGAA AACGATGCGT TTGTTATTAT TAGAAATGGC AGACTAGTTC AAGGAGTAAT CGATAAAAAC GGTTTTGGTG CGGAAACAGG TGTCGTTTTA AACACAATCG TTAAAGACTT TGGTTCAGAA GATGCAAGAA CATTCCTTGA TTCAGCAACG AAAATGTCAG TAAAATCGAT GATGTTAAGG GGATTTACAA CCGGGATTGA CGATGAAGAT ATTCCTTCTG AAGCTATTCA AGAAATTCAA GATTTATTGG ACAAAGCAGA AAGTGACGTT CAGGAAATCG TTGAAAGATA TGAAGGTGGA ACGCTAGATC CACTTCCAGG AAGAGGCATT GAAGAATCAA GGGAAGCCTA CATCATGCAA ATTCTTGGTA AGGCAAGAGA CGATACAGGT AAAGTTGCAG AAAAATACTT AAGTAAAGAA AATCATGCTG CCTTGATGGC AAGAACCGGT GCAAGAGGGT CTCTTCTTAA CATTACTATG ATGGCCGCAA GTGTCGGTCA GCAGTCTGTT AGAGGGGGCA GGGTATTTAG AGGATACCGT GGAAGGACGC TCCCCCACTT TGGAGAGGGA AGTTTAGATG CAAAATCACA CGGGTTTGTT AGAAGTTGCT ATAAAAAAGG ATTAGCGCCT ACAGAATACT TTTTCCACGC AATGGGTGGT AGAGAAGGTT TAGTTGACCA AGCAGTAAGA ACTGCACAGT CAGGTTACAT GCAGAGAAGG CTTGTAAATG CATTACAGGA TATAAAAGCA GAATATGATG GTACTGTAAG GGATTCACGA GGAATTATTG TTCAATTTAA TTACGGGGAA GATTTAGTAG ATCCTTCAAA AGCAGACCAC GGAAAAGGCG TAGATTTAGA TAAAGTATTT ACAAAAGTCA TTTCAAAATA TGAAAATTAA
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Protein sequence | MDRFDVPKEI GDITFGLLSP EQIRTMSVAK IVTADTYDDD GYPIDGGLMD TRLGVIDPGL VCKSCSGRVG TCPGHFGHIE LSKSVIHIGF AKDIYKLLKA VCPHCGKVTV TEIKRDEYLE KMLKLEEDGG DPWTLSDDLL KEAAKSSVCP SCGEVKYDIK YDKPTTYHQL DGKSQKQLTS SEVREILEKI PNEDCKLLGI NSRVARPEYM VLTVLPVPPV TVRPSITLES GERSEDDLTH KLVDIIRINQ RLEENINGGA PNLIIEDLWD LLQYHINTYF DNEAPGIPPA RHRSGRPLRT LAQRLKGKEG RFRHNLAGKR VNFSARTVIS PDPRLSINEV GIPELIAKEL TVPEKVTPYN IERIRKLIEN GSDKHPGVNY VIKKVKTKDG KEEEYKIKIT DTNKKMWVEN IVDGMVVERH LGDGDVVLYN RQPSLHRMSI MAHKVKVLPY RTFRHNLCVC PPYNADFDGD EMNVHVPQSE EARAEAETLM LVEKHIISPR YGGPIIGAIH DFVSGAYVLT SSNFIKDEAL TLLKSSGFGS ELGEPDFVEN GIEYYSGKSL FSKTLPKGLN LQYKAKVCKK CVQCKREECE NDAFVIIRNG RLVQGVIDKN GFGAETGVVL NTIVKDFGSE DARTFLDSAT KMSVKSMMLR GFTTGIDDED IPSEAIQEIQ DLLDKAESDV QEIVERYEGG TLDPLPGRGI EESREAYIMQ ILGKARDDTG KVAEKYLSKE NHAALMARTG ARGSLLNITM MAASVGQQSV RGGRVFRGYR GRTLPHFGEG SLDAKSHGFV RSCYKKGLAP TEYFFHAMGG REGLVDQAVR TAQSGYMQRR LVNALQDIKA EYDGTVRDSR GIIVQFNYGE DLVDPSKADH GKGVDLDKVF TKVISKYEN
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