| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0623 |
|---|
| Symbol | |
|---|
| ID | 5324473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 677511 |
|---|
| End bp | 678485 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640786288 |
|---|
| Product | flap endonuclease-1 |
|---|
| Protein accession | YP_001323141 |
|---|
| Protein GI | 150399374 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
|---|
| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGTTC AGTTTGGAGA TATAATTCCT AAAAAAGAAA TCTCTTTAAA ACTTTTAAGA
ACTAAATCAG CAGCAATAGA TGCAATGAAT GTAATTTACC AGTTTTTATC AAGCATTCGC
CTAAAAGACG GGAGTCCTTT AAAAAATAGG AGTGGGGAGA TTACATCAAC TTATAATGGT
ATATTTTATA AAACAATATA TATGTTGGAA AACGAAATAA CTCCAATATG GGTTTTTGAT
GGAAAATCGC ATGATTTAAA AGAAAAAACC AAAGAAGATA GGCGAAAATT GCGCCAAAAC
GCACTTGAAA ATTACCTCGA AGCAAAAGAA CAGGATAATT TAGAAAATAT GCAAAAATAT
GCAAAAAGAG CTAATTTTCT AGATAAAAAA ACAATTGAAA ATTCTAAACG GCTTTTAGAA
CTCATGGGTG TCCCATATAT TAATGCACCT TCCGAAGGAG AAGCCCAATG TGCAGAACTT
GTAAAATCAA AAAATGCGTC ATTTGTAGTA AGTCAAGATT ATGATTCTAT TCTTTATGGT
GCAGAAAGCG TTGTAAAAAA CATAACTTCG TCAAACAAGA GTCTAGAATT GATTGAACTT
TCAAAAGTTT TAACTGAACT AAATGTTAAT CTTTTAGAAC TAATTGATGT AGCGATATTA
ATTGGTACAG ATTATAATCC AGGGGGAATT AAGGGAATTG GCCCAAAAAA AGCATTTGAA
GTTGTCAAAA AAGGGCAAAT GGAAAAATAT GCTTTTGAAA TTCAAAACTA TTCTGAAATT
AGAAAAATAT TTGATGAACC AAACGTAATA ACTGACTACG AAATCGGGTT AAAACTTCCA
AGAAAAGACG AACTAATTGA ATTTTTAGTG GAAGAAAATG ACTTTTCAAA AGAACGGGTA
TTACCCAATA TCGAAAAACT AGATTTACTG TTGGGTAACA AAAAATCCCA AAAAAGCCTT
GAATCGTGGT TTTAG
|
|---|
| Protein sequence | MGVQFGDIIP KKEISLKLLR TKSAAIDAMN VIYQFLSSIR LKDGSPLKNR SGEITSTYNG
IFYKTIYMLE NEITPIWVFD GKSHDLKEKT KEDRRKLRQN ALENYLEAKE QDNLENMQKY
AKRANFLDKK TIENSKRLLE LMGVPYINAP SEGEAQCAEL VKSKNASFVV SQDYDSILYG
AESVVKNITS SNKSLELIEL SKVLTELNVN LLELIDVAIL IGTDYNPGGI KGIGPKKAFE
VVKKGQMEKY AFEIQNYSEI RKIFDEPNVI TDYEIGLKLP RKDELIEFLV EENDFSKERV
LPNIEKLDLL LGNKKSQKSL ESWF
|
|---|
| |