| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4144 |
|---|
| Symbol | |
|---|
| ID | 4178591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | - |
|---|
| Start bp | 40981 |
|---|
| End bp | 42507 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638059052 |
|---|
| Product | phage integrase-like SAM-like |
|---|
| Protein accession | YP_665775 |
|---|
| Protein GI | 110346957 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGGGG GCGGGCTCGA GCCCGTCCCC CGGCAAAAAC TTCGGCGCCG TTTGGGAGGT
CCATTGCCGC AGCTGTTCTT CACCGATCTT TCCGCCCTGC GCCGTTCCGT GACGGTCAAC
GGCGCGACAT ACGAGTTGTC CTCGGACGAG ATAGCGGCTG CGGACAGCAT CGGCCTCATC
GAGGGCATGC CGTTCATTCT GGGAAGCGAC GGCACCTACG ATCACCATCT CAACCGTTTC
CTCCGATCGT GCCCGACCAT GGGCGTGCGC TCGATGAACA GCCTTCGCGC CTATGCGCGG
GACATTATCG TCTGGATGCG CTTCCTCGAA GAGCGACAGA ACGGCAAGTC TGTCTGGTCG
GCAGATCGCG ATGACATCGC GGCATTCCAC GAAGCCCGGC GCTTGTCCGA ACCTCCGTTC
CGGATATCGG CCTCTTCCTG GAACCGGATG ATCGCGGCAC TCGACAAGCT TTATCGGTGG
GCAGTGGACG AGAAGATTAT TGCCGCGGCT CCGTTCACTT ACCGGCAGCT CTGGTCACGC
GCGTCGACTT CGGGAGCGGT CATAGCCGTT GCGGTGAACT GCTCCAAAGA GAGCGGAGCT
CGCAATGGCG ACATGCGCTT CCTGGACCTG CCGCGCTATC TGGTGTTCCG CGATGTCGGG
CTGCGCGGCA GGCTTCCCGA TGGGCGGGAA GACCCGACAC GGCGAGGCCG CAACGGAGAG
CGCAATGCGC TGTTCGCGGA ACTGCTGATC ACGACCGGTC TGCGGCTGCA GGAAGCGTCG
AGCTTGCTGC TGAACGAGTT GCCCACACTG GATACATGCC TGGATTCCAC GGCCCGATCT
CTGCCCTTCC GATTGGCCGC CGCGACCGCA AAGGGTTCGC GCGGCCGGGA TATCCGCATG
CCGATCCGTC TGATCGGGCA GTTGCACGAC TATGTCCGGA TCGAACGGGA CAACGCGCTT
GGACGAGCTC GGCGGAGCGG TCGTATCCGC CGGACGCGTA GCCCGATCCC GGTCGTCGAA
TGCGAGCATC GAGCTCTTCG CCTGAACGAT GGCGACCGCG CGGTGAGGAT GAGCGTCGAT
CAGATGACGC CCGCGGAACG AACGCGGCTC GTGGAAGCCA CGACGGGCGC GCCTCTGGCG
CCCTGGCTGA CCGAAGACGG ATTGCCGATG CCGATGGCGT CGTGGGAAGC CGTGTTCACG
CGAGCCAGCG AGAGATGCCG TCGCTTCGGC TTCGATGACA TGCACGTCAC CCCTCACATG
CTTCGCCACA GCTTTGCTGT CCACATGCTG ACGCTGCTTC TGCGCGAACA GGTTGGCTGG
GTCATCAGCG AGCGATCGCG GCATCTTGGC TCCGCCTACC GCCGAATGAT CGGCGACCCG
CTGCTGAAGC TCCAGAGACT GATGGGGCAC AGCAGGATCG AGAGCACCTA TATCTATCTC
GATCACCTCG CGGACAGCCA GGAGATCGTC GATGCGGCGG TGGGCAATCT CGGCCTGGAT
GTTACCTCCG GGGAGCCGGC GCCATGA
|
|---|
| Protein sequence | MPGGGLEPVP RQKLRRRLGG PLPQLFFTDL SALRRSVTVN GATYELSSDE IAAADSIGLI
EGMPFILGSD GTYDHHLNRF LRSCPTMGVR SMNSLRAYAR DIIVWMRFLE ERQNGKSVWS
ADRDDIAAFH EARRLSEPPF RISASSWNRM IAALDKLYRW AVDEKIIAAA PFTYRQLWSR
ASTSGAVIAV AVNCSKESGA RNGDMRFLDL PRYLVFRDVG LRGRLPDGRE DPTRRGRNGE
RNALFAELLI TTGLRLQEAS SLLLNELPTL DTCLDSTARS LPFRLAAATA KGSRGRDIRM
PIRLIGQLHD YVRIERDNAL GRARRSGRIR RTRSPIPVVE CEHRALRLND GDRAVRMSVD
QMTPAERTRL VEATTGAPLA PWLTEDGLPM PMASWEAVFT RASERCRRFG FDDMHVTPHM
LRHSFAVHML TLLLREQVGW VISERSRHLG SAYRRMIGDP LLKLQRLMGH SRIESTYIYL
DHLADSQEIV DAAVGNLGLD VTSGEPAP
|
|---|
| |