Gene Meso_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3960 
Symbol 
ID4183012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp4264330 
End bp4264686 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content59% 
IMG OID638069855 
Productrare lipoprotein A 
Protein accessionYP_676492 
Protein GI110636284 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCT TGCTGCGCCG ACGCGGCGCA TTTGCTGTTA CTGCCGCTAT GCTTTTTGCG 
CTCATACCGG CTACGGCTCA CGCTCAATGC GGCAGCGCGT CCTGGTATGC GCTTACGTCC
AAAACTGCGT CCGGCGAGCG CATGAATCCG GCCGCAATGA CCGCGGCGCA CCGGAAACTT
CCTTTTGGAA CCAAGATCAA GGTGATCAAC CGGCGGAATG GAAAGGCCGT GGTGGTGCGC
ATCAATGATC GCGGCCCGTT TGTTCGGGGG CGCATTCTCG ATCTATCGAA GGCCGCGGCC
GCAAAGTTAG GCTTCCTGGG TGCAGGACAC ACCCCTGTCT GCCTGGAGGT AAACTAA
 
Protein sequence
MKSLLRRRGA FAVTAAMLFA LIPATAHAQC GSASWYALTS KTASGERMNP AAMTAAHRKL 
PFGTKIKVIN RRNGKAVVVR INDRGPFVRG RILDLSKAAA AKLGFLGAGH TPVCLEVN