Gene Meso_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3483 
Symbol 
ID4179891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3759068 
End bp3759574 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content55% 
IMG OID638069378 
Productpreprotein translocase subunit SecB 
Protein accessionYP_676019 
Protein GI110635811 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.176392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACC AGCCCAGCGG AAATAACGAC GCAAAGCAGG CGGAAACGAA CGGAAATACC 
GTTCCGGCGA GCCTGAACGT GCTGACGCAG TATATCAAGG ACCTCTCTTT CGAGAGCCCC
GGAGCGCCTC AGTCCTTGCG TGCTCGGGAC AAAGCGCCTT CGATCAACAT CAATGTGAAT
GTCAATGCAA ATCCGCTGGG CGGCACAGAC TATGATGTCT TGCTGACGCT TACGGCAAAG
GCAGAAGCCG ACAATGTGGT GCTTTTCAAT GTCGAGTTGA TCTACGGGGG CGTGTTTCGC
ATTCAGGGAT TCCCCCAGGA GCATATGCTG CCGCTTCTCT TCATTGAATG TCCGCGATTG
CTTTTCCCGT TCGCGCGGCA AATCATTGCG GATGCGACGC GAAATGGAGG CTTCCCGCCC
CTCATGATTG ACCCGATCGA TTTTGCGCGC ATGTTCCAGC AGAGGCTGGC CGAGGAAGAA
GCCCGGAGGA AAGTTCAGGT TTCCTGA
 
Protein sequence
MADQPSGNND AKQAETNGNT VPASLNVLTQ YIKDLSFESP GAPQSLRARD KAPSININVN 
VNANPLGGTD YDVLLTLTAK AEADNVVLFN VELIYGGVFR IQGFPQEHML PLLFIECPRL
LFPFARQIIA DATRNGGFPP LMIDPIDFAR MFQQRLAEEE ARRKVQVS