| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3453 |
|---|
| Symbol | |
|---|
| ID | 4181694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3731500 |
|---|
| End bp | 3731979 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638069347 |
|---|
| Product | rRNA large subunit methyltransferase |
|---|
| Protein accession | YP_675989 |
|---|
| Protein GI | 229259626 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTCGTATCG TCATACATGC TGTTGGCCGT ATGAAAGCTG GACCCGAAAG GGAACTGGCC
GATCGCTATC TGGATCGCGC GGCAAAGGCC GGACCGGCCA TCGGAATGGA ATTGGCCGGT
GTGAGCGAAA TACCGGAGAG CCGCGCCAGA TCCACCCTCG AGCGAAAGAG GGAGGAGGGC
CGCAAGCTCC TCGACTTTGC ACAAGGCGGA GCGTTGATAT TGCTTGACGA GCGAGGAAAG
AATTTGTCCT CGCGGGAGCT TGGCGACCGC TTTGCGTCTT TTCGCGATTC AGGCTTTCGG
CAAATCGTGA TGGCGATCGG CGGGCCTGAT GGACACGACG ATGCCGTCAG GGCGGCGGCC
GACCTCAGCA TCAGCTTTGG TGCGCAGACA TGGCCGCACC AGCTCGTTCG TGTCATGTTG
GCCGAGCAGC TGTACCGTCT GATAACCATC CTTTCCGGCC ACCCGTATCA CCGGGACTAG
|
|---|
| Protein sequence | MRIVIHAVGR MKAGPERELA DRYLDRAAKA GPAIGMELAG VSEIPESRAR STLERKREEG
RKLLDFAQGG ALILLDERGK NLSSRELGDR FASFRDSGFR QIVMAIGGPD GHDDAVRAAA
DLSISFGAQT WPHQLVRVML AEQLYRLITI LSGHPYHRD
|
|---|
| |