Gene Meso_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3418 
Symbol 
ID4183116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3692915 
End bp3694297 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content63% 
IMG OID638069312 
ProductFmu (Sun) 
Protein accessionYP_675954 
Protein GI110635746 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGGG GCGAAGCCCA AGGCGTTCAG CCGAGGCGAA AAAGGCCAGC TTCCGCTCGC 
CCCGCGATTG AAGATAAACC CGGCCTCGAT GCTCGAAGAA CAGCGGCGAA GCTCCTAGCT
GCCGTCATAG ACGCGCGCAC GCCGCTTGAC GCTCTCACCG ACAACGAGCA TGGCCATCCC
CAATATCTTT CCCTTGAGCA GCGGGACCGG GCGCTTGTAC GGGCAATCCT CATCAGCGCG
CTGCGTCACC GCTGTACGAT CGAGAAGCTT GTCGGCAGGA GGCTCGACCG GCCACTGCCG
CCCAATGCTC ACTCGCTTTC ACATATTCTG CATGTCGGTG CGGCGCAGAT CCTTTTTCTC
GACGTGCCGG ATAGCGCCGC GGTAGACCTC GCGGTGACAC AGGCCAAGGC AGATCCGCGT
GCGGCGCGCT TTTCCGGTCT CGTGAATGCG GTCCTGCGCA ACCTCGCCCG CCGCAAGCAT
GAACTGCCGA AGGCACTGGA AAACACCCGC GATGCACCGG CCTGGTTCGC CGAACGGCTG
GAGGCCGTTT ATGGCCATGA TCAGACCGAC GCGATCCTGA AGGCCCACCG CCTCGAAGCT
CCTACCGATT TCACGGTGAG ATCCGATCCC GCCCTTTGGG CGGAGCGGCT GGGCGGCCGC
GTGCTGCCCA ATGGGTCGGT GCGGCTCGAT CGCTTACCCT CTCCGATACC GGAACTGCCG
GGCTTCGCGG AAGGCGCCTG GTGGGTACAG GATGCGGCGG CAAGCCTGCC TGCCCGGCTG
CTGGGCGATG TTGAGGGCCT GTTCGTCGCA GATCTCTGCG CAGCACCCGG CGGCAAAACG
GCAGCACTGG CGCTTGAGGG CGCCTGGGTT AGCGCCGTAG ATATTTCGGC AAGCCGCTTG
AAGCGGCTCA AGGCCAATCT CGACCGGTTG GGCCTTTCGG CCGAGATCGT ACAGGCGGAC
GTGCTCTCAT GGGAGCCGGA GCGCAAATTT GATGCGGTTC TGCTTGATGC ACCCTGCTCA
TCCACGGGCA CGGTGCGGCG CCATCCCGAC GTGCCGTGGA CCAAGACACC CGAAGACATT
GCAAAGCTTG CCGACCTGCA AAGACGATTG CTTGAGCGCG CGCTTACGCT CATCCATCCA
AGCGGTATCG TCGTCTTCTC GAACTGCTCT CTGGACCCGT CCGAAGGTGA GGAGCTGGTG
AGGGATGTTC TCGGCAAGCA GGCCGGAATC GCCCTCGACC CGATCCTCCC GGAGGAATTG
CCTGGGGCGG AGCATTTTGT CACGGCGGAA GGATTTTTAC GCACGACGCC CGCGCATTTC
GGGACAGAAA GCCAGCTCGA CGGTATCGAT GGCTTCTTCG CTGCACGTCT GAGGCGGTCA
TGA
 
Protein sequence
MSGGEAQGVQ PRRKRPASAR PAIEDKPGLD ARRTAAKLLA AVIDARTPLD ALTDNEHGHP 
QYLSLEQRDR ALVRAILISA LRHRCTIEKL VGRRLDRPLP PNAHSLSHIL HVGAAQILFL
DVPDSAAVDL AVTQAKADPR AARFSGLVNA VLRNLARRKH ELPKALENTR DAPAWFAERL
EAVYGHDQTD AILKAHRLEA PTDFTVRSDP ALWAERLGGR VLPNGSVRLD RLPSPIPELP
GFAEGAWWVQ DAAASLPARL LGDVEGLFVA DLCAAPGGKT AALALEGAWV SAVDISASRL
KRLKANLDRL GLSAEIVQAD VLSWEPERKF DAVLLDAPCS STGTVRRHPD VPWTKTPEDI
AKLADLQRRL LERALTLIHP SGIVVFSNCS LDPSEGEELV RDVLGKQAGI ALDPILPEEL
PGAEHFVTAE GFLRTTPAHF GTESQLDGID GFFAARLRRS