| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2674 |
|---|
| Symbol | |
|---|
| ID | 4180237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2901825 |
|---|
| End bp | 2903648 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638068562 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_675216 |
|---|
| Protein GI | 110635008 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG AAGTTGACCG GCTGGCAGCC GCGCACGGTG TCCTGCGCTC CTATCGCGCG
CTGGACGGAA CCATCTCGCG CGCATCGGAT GATGCCGTAC AGGCGATCCT GAATATTCTG
GGCGTGGAGG AAGGTGCCGC GCCTCAGGCT GCCGCAGCAT CCGGCCCGTT TCCTCCGCCG
CCTCAGGCTG CCGAAGGCGC CGCGTGTTTT CTTCCCGATT TTCTGCAACA GGGCAGGGCG
TGGGGCGTCA CCTGCCAGCT CTACGGACTG CGGTCCCACC GCAACTGGGG CATCGGCGAT
TTTGAGGATC TGGCGCGTCT TGGCGAGCTC GTGGCACGAA TGGGAGCCGA TTTTCTGGGC
GTCAATCCCT TGCATGCGCT CTTCCTGGCA GAACCGCAGA AGGCGAGCCC GTTTTCGCCG
AGCGACCGGA ATTTTCTAAA CCCGCTCTAT ATCGCCGTCG ATCAGGTGGA GGGGTTCGAC
CCCGGCTTGG ATCTGGACGA GAGCGCTCTT GCTTTGTTGA GGGAGAGCAA ACTGGTCGAT
CACAAGGCCG TGGCGGACCA CAAGCTTTCG GTGCTGCGCG GGATTTACGA GCGGACGCGA
GGGACTGACG GGCAAGGACT CGACGCTTTC AAGGAGCGCG GCGGAGAGGC GCTGTGGCGC
TATGGTCTGT TCGAGGCGAT CAGCCTGGAA ATGGTACGCC GCGGCATCGG TACCGGCTGG
CATCCCTGGC CAGAGGCGTT CAAGGATCCC GCTAGCGAGG CGGTGGGACA GTTCGCGCGG
GAGCACCAGG GGGAGATCGA GTTTCTTGTC TGGTTGCAGT GGGTGGCGGA CCGGCAATTG
GAGCAGGCTT CAAAGCGGCT GCAAGCCGCC GGGATGCGCA TAGGGCTTTA TCTCGACCTT
GCCGTGGGCA CCGCGCCCGA TGGTGCGGCC ACATGGAGCG ACCGCACGCT GACCGTGGTC
GGGGCGGAGA TCGGTGCGCC GCCGGATATG TTCAATCCGG AAGGCCAGCG CTGGGGTCTG
GCGCCGTGGT CGCCTTCCGA GATCGCTGCT CGGGAATTCC GGCCGGTGCG CCGCTCCTAC
GAGGCAATCC TGCGGCATGC GGGGGCTCTC AGGATCGACC ATGCAATGGG GCTTTACCGG
CTTTTCTGGA TCCCGGACGG CTTTCCCGCA GGGGAGGGCG CTTACGTGAT TTATCCGATG
CCGGACGTGG TTCGCGTTCT GGCCGAGGTA TCGCAAGGAT CGAGAGCGCT TATCATCGGC
GAGGATCTGG GGGTGGTGCC GGAGGGTTTT CGCGAGCAGA TGGACCGTGC AAACCTGCTG
GGCTACCGCA TCTTCTATTT CGAGCGGGAC GATCATAATT TTGTTCCGCC CGAACGCTGG
CCGCGATCGG CCTTGGCCTG CGTCGGGAGC CACGACACCA ACACGCTCGC CGGCTGGTGG
ACAGGCAGCG ATATCGATGA GCGCCAGCGG ATAGGCCTTT ATGACGAGGA AGCAGCGCGT
AAGGAGCGCG AGCGCAGGCA GCGGGAAAAA AGCCAGGCGA TAGAAATACT GCGCGCCCGC
GGCCAACCGG AGATCGGCGA AGAATTCAAT GAAAGCGTCG CGGCCGGCAT TCATCGGCTG
GTGGCGTCTT CGCCTTCGCG CCTCGTTGCC GCCCAGATGG AAGATCTGCT TGGATTGGCG
GAGCAGTCGA ACATACCTGG AACCGTGGAC GAACATCCCA ACTGGCGGCG GAAGCTTCCC
GTCTTCATCG AGGAACTGGA GAGCGCTTCG ATGCTGCGTG CCGTCATCGG CGCAATCCGG
GAAGAAAGGC CGCGCGGTAC ATGA
|
|---|
| Protein sequence | MSEEVDRLAA AHGVLRSYRA LDGTISRASD DAVQAILNIL GVEEGAAPQA AAASGPFPPP
PQAAEGAACF LPDFLQQGRA WGVTCQLYGL RSHRNWGIGD FEDLARLGEL VARMGADFLG
VNPLHALFLA EPQKASPFSP SDRNFLNPLY IAVDQVEGFD PGLDLDESAL ALLRESKLVD
HKAVADHKLS VLRGIYERTR GTDGQGLDAF KERGGEALWR YGLFEAISLE MVRRGIGTGW
HPWPEAFKDP ASEAVGQFAR EHQGEIEFLV WLQWVADRQL EQASKRLQAA GMRIGLYLDL
AVGTAPDGAA TWSDRTLTVV GAEIGAPPDM FNPEGQRWGL APWSPSEIAA REFRPVRRSY
EAILRHAGAL RIDHAMGLYR LFWIPDGFPA GEGAYVIYPM PDVVRVLAEV SQGSRALIIG
EDLGVVPEGF REQMDRANLL GYRIFYFERD DHNFVPPERW PRSALACVGS HDTNTLAGWW
TGSDIDERQR IGLYDEEAAR KERERRQREK SQAIEILRAR GQPEIGEEFN ESVAAGIHRL
VASSPSRLVA AQMEDLLGLA EQSNIPGTVD EHPNWRRKLP VFIEELESAS MLRAVIGAIR
EERPRGT
|
|---|
| |