Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2318 |
Symbol | |
ID | 4180849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 2472004 |
End bp | 2473350 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638068211 |
Product | conjugal transfer protein TrbL |
Protein accession | YP_674871 |
Protein GI | 110634663 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3846] Type IV secretory pathway, TrbL components |
TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.774569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGGCG CCGGCGTTAT CGACGATTTC CTGTCGGTCT TCACCAGCTA CATCGACTCC GGCTTCGGTC TGCTCGGCGG CGAGGTGGCC TTCATCGCTA CCACGCTGAT CGTCATCGAC GTGACGCTGG CCGCGCTGTT CTGGAGTTGG GGCGCCGATG ACGACATCAT CGCGCGCCTC ATAAAGAAGA CGCTGTTTGT CGGCGTCTTC GCCTACCTGA TTTCCAACTG GAACTCGCTC GCCCGCATCG TGTTCGAGAG CTTCGCTGGG CTCGGCCTGC AAGCCTCAGG CACCGGCTTC TCAGAGCAGG ACCTGATGCG TCCCGGTCTG GTCGCTCAAA CCGGGCTCGA TGCCGCCCGG CCACTGCTGG AGAGCATCTC CGACCTGATG GGCTGGGTCG CGTTTTTCGA GAACTTCATC CAGATCGCCT GCCTTCTGTT CGCCTGGGCA CTGGTCCTGC TTGCCTTCTT CATTCTGGCG ATCCAGCTCT TCGTCACACT CATCGAATTC AAGCTGACGA CGCTCGCCGG CTTCGTGCTG ATCCCCTTCG GCCTGTTCGG CAAAACGGCC TTCATGGCTG AGCGCGTCCT CGGGAACGTG ATTTCCTCCG GCACCAAGGT GCTGGTGCTC GCCGTCATCA TCGGCATCGG CTCGACTTTG TTTGGTCAGT TCACCCAAGG TTTCGGTGGC CAGACGCCGA CCATCGACGA GGCGATGGCC GTCGTTCTCG CCGCGCTCTC ACTGCTCGGC CTCGGCATCT TCGGCCCTGG CATCGCCAAC GGCATCGTTT CCGGCGGCCC GCAACTCGGT GCTGGGTCCG CTGTCGGCAC CGGGCTCGCA GTCGGCGGCA TGGTTCTCGC CGGCGGCGCG GCTGCTGGCC TTGCCGCGAG AGGTGGCGCG ACGGTGATTT CCACTGGAGC GGCGGCTGTC CGTGGCGGTG CAGCCGCAGC AGGAGCCGCC TCCGCCGGCT ACAGCCTCGG TTCCCTCGGC CAATCGTGCG CGACCGGCGT TGCCTCGGGG CTTGGAGGCA TGGCGCGGGC GGCGGGAGGC ACGGCGGCGT CACCCCTTCG CCGTGCAGTG GGAAGCCTCA GGTCCAGTTT CTCCGCCGGC GCGAGGAGCG GCTTTGACGC GACCGGCGGC TCTTCGACCA TGGGCACGAT ATCCGATGCC GGCGCAGCCC CTGCATCGCC GGCGCACATC TCTGACGGCC CGCCGGCCTG GGCACAGCGC ATGAAGCGCG GCCGGGCGGT GAGCCACGGC ATCACGGCCG CCGCGCACGC CGTCCGCTCC GGCGACAGCC AAGGCGGCGG CTCTTCCGTC AACCTCTCCG AAGGCGACAA GAAATGA
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Protein sequence | MGGAGVIDDF LSVFTSYIDS GFGLLGGEVA FIATTLIVID VTLAALFWSW GADDDIIARL IKKTLFVGVF AYLISNWNSL ARIVFESFAG LGLQASGTGF SEQDLMRPGL VAQTGLDAAR PLLESISDLM GWVAFFENFI QIACLLFAWA LVLLAFFILA IQLFVTLIEF KLTTLAGFVL IPFGLFGKTA FMAERVLGNV ISSGTKVLVL AVIIGIGSTL FGQFTQGFGG QTPTIDEAMA VVLAALSLLG LGIFGPGIAN GIVSGGPQLG AGSAVGTGLA VGGMVLAGGA AAGLAARGGA TVISTGAAAV RGGAAAAGAA SAGYSLGSLG QSCATGVASG LGGMARAAGG TAASPLRRAV GSLRSSFSAG ARSGFDATGG SSTMGTISDA GAAPASPAHI SDGPPAWAQR MKRGRAVSHG ITAAAHAVRS GDSQGGGSSV NLSEGDKK
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