| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2100 |
|---|
| Symbol | |
|---|
| ID | 4182669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2253986 |
|---|
| End bp | 2254789 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638067996 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_674657 |
|---|
| Protein GI | 110634449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA TTCAACAAGC CCTGCTCACC AATGTGCAGC GGCCGACACC ACCTTCGGCA
ATTTCCAACG CGCTCGTCTT CGGCTGGCGC GCGGTGCTGA AGTTCAAGCA CGTGCCGGAG
CAGCTCTTCG ACCTTGTCAT GACGCCGCTG ATGTTCACGC TGCTCTTCAC CTTCGTGTTC
GGCGGCGCGC TGGCTGGCTC ACCGGGCGAA TATCTGCAGT TCTTCCTGCC GGGGATTCTG
GTGCAGACGG TGGTCTTCAA CTCGGTCTAT TCCGGCATGG GGCTTTCGAC AGACCTCTCG
AAAGGGCTGT TCGAGCGCTT CCGGTCGCTC CCCGTCTGGC CGCTCGCGCC CTTTGCCGGG
CTGATGGTGG GCGATGTGCT GCGCCATGTG ATCGCGGGCG CCATCATCCT CGGAATCGGC
CTCATCCTCG GCTACAGGCC GGAAGCGGGA ATCGGGGGCG TGCTTGCCTC CTTCCTGCTC
TTGATCGCCA TCGGCTTCGG TACGGGCTGG ATCTTCATTG TGCTGGGGTT GATCATCCGT
ACGCCCATGA CGGTGATGAC GATCGGCTTC ACCTTTATCT TCCCGCTGGT CTTCGCCTCC
AATATCATGG TGCAGCCGGA AACCATGCCC GGCTGGCTTG CGGCCTTCGT CAACCACAAC
CCGGTGTCCT TCATGGCTAC GGCGCTGCGC GGGCTGATGG CGGGCACGGC GACGGCACAG
GAGGTGTTGC TGGCGCTTGC CGCGCCGGTT AGCCTGACGA TCGTGCTGGC GCCGGTCGTG
CTGTGGCTTT ACCGGCGCCA TTAA
|
|---|
| Protein sequence | MSEIQQALLT NVQRPTPPSA ISNALVFGWR AVLKFKHVPE QLFDLVMTPL MFTLLFTFVF
GGALAGSPGE YLQFFLPGIL VQTVVFNSVY SGMGLSTDLS KGLFERFRSL PVWPLAPFAG
LMVGDVLRHV IAGAIILGIG LILGYRPEAG IGGVLASFLL LIAIGFGTGW IFIVLGLIIR
TPMTVMTIGF TFIFPLVFAS NIMVQPETMP GWLAAFVNHN PVSFMATALR GLMAGTATAQ
EVLLALAAPV SLTIVLAPVV LWLYRRH
|
|---|
| |