Gene Meso_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1992 
Symbol 
ID4182079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand+ 
Start bp2134922 
End bp2135584 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content57% 
IMG OID638067888 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_674550 
Protein GI110634342 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCAGC GATTTTCCTT TCCCTCGCGG AAGCAGGCCT CGCCTGGTGC TTCTAAATCA 
AACTCGGAAC CAGGTGGTTA TCTCATGATG CGCTATATCT TGGTTGGCAT CATCCTTCTT 
ACAGCGGGGG CGTTCGGCGC CATCGCTTTC AATTTCTACA GCGGCCAGAA CCAGGCGGTT 
GCGTTCGGCG CGCCCTTCGA GCTTATCGAT CACGAGGGGC AGCCGATCAC CGAGAAGGCG 
CTCCAGGGGC GCCCCACCGC CCTCTTCTTC GGTTTCACCC ATTGTCCCGA CGTTTGTCCG 
ACCACTCTTT TCGAGATGCA GGGCTGGCTG GATCAGCTTG GCGACGAGGG GAAGGATTTG 
CAGGCGTTTT TCGTCACCGT CGATCCCGAG CGGGACACGC CCGAGGTGAT GAAGACCTAT 
CTCAGCAATT TTTCCGATCG GGTGGTCGGC ATCACCGGCG ATCCTCAAAA AGTCGAGGAG 
ATGGTGAAAG CGTATCGGAT CTATTTTCGT AAGGTCGAGC TGGAAGGGGG CGGCTATACG 
ATGGATCACA CCGCCTCTGT AATGCTCCTC GACAGCAGCG GCGATTTCTT CGGCACCATA 
TCCTACGAAG AGAACCAGGA AACGGCTATC GCAAAGCTTC GCCGGCTGAT AAGGGAAGGC 
TGA
 
Protein sequence
MGQRFSFPSR KQASPGASKS NSEPGGYLMM RYILVGIILL TAGAFGAIAF NFYSGQNQAV 
AFGAPFELID HEGQPITEKA LQGRPTALFF GFTHCPDVCP TTLFEMQGWL DQLGDEGKDL 
QAFFVTVDPE RDTPEVMKTY LSNFSDRVVG ITGDPQKVEE MVKAYRIYFR KVELEGGGYT 
MDHTASVMLL DSSGDFFGTI SYEENQETAI AKLRRLIREG