| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1920 |
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| Symbol | |
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| ID | 4182298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 2054565 |
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| End bp | 2055716 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638067815 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_674478 |
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| Protein GI | 110634270 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00498247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTA TATCCAACCC AGAGGCAAAG GCGGAGCCGG TCGAGGTCGA GCAGCAGAAG
GCAGGACCGG TGGCTTTGCC GCAACCTGCC GATCTCAAGC CGAAGAAGAA AAAGAACCGC
CTGCGGATGG TGCTGATGCT CGCGGCACCG CTTGCGCTTG CCGTTGCGGG AACATGGTGG
TGGGTGACCA GCGGGCGATA TCAGGAGACG GACGACGCCT ATCTGCAGCA GCCCAAGCTT
TCGATCGCCT CCCAGATCGC GGGCCGCGTG GTGGAATCCA ATGTCGCGAA CAGCATGCAC
GTGGAAGCCG GCGCGGTGCT TTTCAAGGTA GACCCGGAGC CCTACCGAAT CGCGCTTGCG
CAGGCGGAAG CTGCTCTTGA GGGAGCGCGC CTGCAGGTAG AGCAACTGCG CGCCTCATAC
AGCCAGGCCG AGGCTCAGGC GCGTGATGCA GACAGCGAAG TCGCCTATCT TGAGACGCAG
CTTAAGCGCC AGCAGGATCT TTCGGGGAAG GGTGTGGCGT CCCAGTCATC GCTGGATCAG
GCAGAGCGCA ACCTGCAGAA GGCGAGGGAG AGCCTAAGCG CTACGCGGCA AGCTGTTGCG
AGCGCCCTGG CCGCACTTGG CGGCAATCCG AAAATCGAGA CGGACAAGCA TCCGACGGTG
CTTTCGGCTC TGGCAGCCCG TGACAAGGCC GCTTATGAGC TGGCTCAGAC GACCGTGAGG
GCTCCAGCCG ATGGCATCAT CGCCCAGGCG TCGGATTTCC GCAATGGCCA GTTCGTCAGC
ACAGGCACGC CTCTGTTCTC CCTGGTGGAG ACCAGAAGCT CCTGGGTCGA GGCCAATTTC
AAGGAGACGC AGCTTACCCA CATGAAGCCG GGCCAAAAGG CCGAGATCGT CTTCGATACG
TATCCGGACC GGCCGCTGGA AGCCACCGTC GAGGATATCA GCGCGGGAAC GGGGGCGGAG
TTCTCCCTGC TGCCTGCCCA GAACGCTACC GGCAATTGGG TAAAGGTGAC GCAACGCATT
CCCGTTCGCC TCAAGCTTCA GATCGAAGAG CCTGAACTTC TGCTGCGCAC CGGCATGAGC
GCCACCGTGA CCGTCGATAC CGGGGTTTCA CACGGCTTTC CGGGCCTGAC TACGGCGCAC
GCGACCGAAT AG
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| Protein sequence | MNAISNPEAK AEPVEVEQQK AGPVALPQPA DLKPKKKKNR LRMVLMLAAP LALAVAGTWW
WVTSGRYQET DDAYLQQPKL SIASQIAGRV VESNVANSMH VEAGAVLFKV DPEPYRIALA
QAEAALEGAR LQVEQLRASY SQAEAQARDA DSEVAYLETQ LKRQQDLSGK GVASQSSLDQ
AERNLQKARE SLSATRQAVA SALAALGGNP KIETDKHPTV LSALAARDKA AYELAQTTVR
APADGIIAQA SDFRNGQFVS TGTPLFSLVE TRSSWVEANF KETQLTHMKP GQKAEIVFDT
YPDRPLEATV EDISAGTGAE FSLLPAQNAT GNWVKVTQRI PVRLKLQIEE PELLLRTGMS
ATVTVDTGVS HGFPGLTTAH ATE
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