| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1407 |
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| Symbol | |
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| ID | 4180999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 1503535 |
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| End bp | 1504260 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638067296 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_673968 |
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| Protein GI | 110633760 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.959158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGGTG GCCAGGACGA CGCCCTTCAA GCTGGGATCG TGGAAACTGT ACGGAGCGCG
AAGAATATTG AGGAGGCTAT ATTCTTATTG CGTGACGGCC TCGGCCTCGC GCATGTGAGC
TTCCATCTGA ATGTTTCCGG AGCAGCCCCG CTGGATTATC CCTATGTGAG GACGACTCTC
CCCTCACAGT GGATCTCCCG CTACGTTCTG CGTACGTATG TCGGTCACGA TCCGGTGATG
CGCGAAGGCT TTTCATCCCT GCGCCCCTTT TCATGGCACG AGCTCGAAAT GAGCGAAAAG
GAGCGGGAGT TCATGGAGGA TGCCCGTTCC CACGGTATCG GCGCCCAAGG CTATTCAATT
CCGACGGTGG ATCGGTTCTC CCGTCGCTCG CTTCTGTCGT TGACAGCCGA TCTCGACCTT
GGCCTCTGGG CGGGTTTCAT CCGCCGGCAT GCTTCATCAG TGATCGAAAT TTCTCAGGTC
TTGCACCAAA AGGCGCTTAA TGAACTGGGG ATCGGTGAGC CGTCCGGCGC AACCTTGGCG
CCGCGCGAGA GGGAATGCCT ACTGTGGACC GCTCGAGGCA AGGATTCGAA GGATATCGCC
GGGATTCTCG ATCTGTCCGA GTATACGGTG CGCAGCTATT TGAGAACTGC GCGGCAAAAG
CTGCAATGCA GAACGCTTTC ACAGGCGGTG GCCACGGCCA CGCGGCAACG GATCATCGAT
CCCTAG
|
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| Protein sequence | MLGGQDDALQ AGIVETVRSA KNIEEAIFLL RDGLGLAHVS FHLNVSGAAP LDYPYVRTTL
PSQWISRYVL RTYVGHDPVM REGFSSLRPF SWHELEMSEK EREFMEDARS HGIGAQGYSI
PTVDRFSRRS LLSLTADLDL GLWAGFIRRH ASSVIEISQV LHQKALNELG IGEPSGATLA
PRERECLLWT ARGKDSKDIA GILDLSEYTV RSYLRTARQK LQCRTLSQAV ATATRQRIID
P
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