Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1045 |
Symbol | lipB |
ID | 4180364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1147890 |
End bp | 1148630 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638066925 |
Product | lipoyltransferase |
Protein accession | YP_673607 |
Protein GI | 110633399 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0860459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCAGA CAAGCCAAAC CCGCTTCATC CCGCATTCCC CCTCGCCACC GGTTGAATGG CGAATCGAAC CGGGCCTTAC TCCCTACGAA AAGGCGCTTG CCTTCATGGA ACAGCGCGCA GACGCCATCC GCGCCGGCAC GGCGGGTGAG ATGGTGTGGC TGGTCGAGCA CCCTCCCCTT TACACAGCCG GCACGAGCGC CAGCCCGGGC GACCTGCTCG ATCCGAATCG CCTGCCCGTC TACCAGACCG GCCGCGGCGG CGAATACACT TATCATGGTC CGGGTCAGCG CGTGGCCTAT GTCATGCTCG ACCTGAAACG CCGGCGCGAG GACGTGCGCG CCTTCGTCAC CGCGCTGGAG GATTGGATCA TCGCCAGCCT CGCCCGTTTC AACATCCGTG GCGAGCGCCG GCAGGGACGC GTCGGGGTGT GGGTGGCGCG CCCGGAAAAA TCCCCGCTGC CGGACGGAAC GATCATGGAA GACAAGATCG CAGCCATCGG CATCCGTCTA CGGCGCTGGG TGAGCTTTCA CGGCATTGCC GTCAATGTGG AGCCGGAGCT TGCGCATTTT TCGGGCATCG TGCCCTGCGG AATCTCGGGC TTCGGCGTCA CCAGCCTCGT CGATCTCGGC CTGCCCGTCA CCATGGCCGA TTTCGACGTT GCGCTAAAGG AAGCGTTCGA GGAGGTCTTC GGGGCAGCAG AGCCGCTTTT CGAAACGGAT TCCCTGAAAA GGAGTGCCTG A
|
Protein sequence | MSQTSQTRFI PHSPSPPVEW RIEPGLTPYE KALAFMEQRA DAIRAGTAGE MVWLVEHPPL YTAGTSASPG DLLDPNRLPV YQTGRGGEYT YHGPGQRVAY VMLDLKRRRE DVRAFVTALE DWIIASLARF NIRGERRQGR VGVWVARPEK SPLPDGTIME DKIAAIGIRL RRWVSFHGIA VNVEPELAHF SGIVPCGISG FGVTSLVDLG LPVTMADFDV ALKEAFEEVF GAAEPLFETD SLKRSA
|
| |