| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_2050 |
|---|
| Symbol | |
|---|
| ID | 9251563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 2051169 |
|---|
| End bp | 2051708 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | Lipoprotein LpqB, GerMN domain protein |
|---|
| Protein accession | YP_003685430 |
|---|
| Protein GI | 297566458 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.638176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGCC GCATGTTGAG TCTTTGGAAC TTGTTAGGGG TCTTGGTGCT AGCGGTGGGC
CTGTGGGCCT TCTGGGCCAG CAGCAACACC ACCGTGAGCA ATGCAGTAAA CCTCCCCTCT
GAGGACCAGA AAGCCAAACC CGGCCCCAAG GCCCTGCGCC TGTACTTCGC CGATCCCAGC
GGGGAAAAAT TCATCGTCGA GACCCGCACC GTAGAACTCG GACCCGATGA GGAAGTGCAC
AATCGGGCTC TAGCTGAGCT GCTCAAGGGG CCGCAGGTCC AGGGAGCGAA CCCGGTGGTG
TCACCGGGAT TACCGGTTCC CACCGTCTTT CTGCGGGACA ATCTGGCCTA CGTGGACCTC
CCGGCGGCTT ATGGCCGATT GGGGCTGGGC ACCACCGGCG AGGTGATGCT GGTATATGGC
CTAGCCTATA CCCTGCTGGA CTTTTCCGAC GTACAAGGGG TGCGCTTCCT GCTCGATGGC
AAGGAGATAG ACTCGCTCGG ACATCTATCG CTCCTCGAGT CTATTCGCAG GCCGCAGTAA
|
|---|
| Protein sequence | MIRRMLSLWN LLGVLVLAVG LWAFWASSNT TVSNAVNLPS EDQKAKPGPK ALRLYFADPS
GEKFIVETRT VELGPDEEVH NRALAELLKG PQVQGANPVV SPGLPVPTVF LRDNLAYVDL
PAAYGRLGLG TTGEVMLVYG LAYTLLDFSD VQGVRFLLDG KEIDSLGHLS LLESIRRPQ
|
|---|
| |