| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1302 |
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| Symbol | |
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| ID | 9250798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus silvanus DSM 9946 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014212 |
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| Strand | - |
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| Start bp | 1283841 |
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| End bp | 1285466 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003684704 |
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| Protein GI | 297565732 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.312205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAGGAG GAAGGATACA CCGCCCTCAG CGTATTTCCA CACCCCTTGA TGGTATCTCC
TCGTGGAGCG ATAAGCCCAT TACGATGCAC AAGGACCAAA GCGGCACCTG GCGGGCCGAG
GTGGATTTGC CGGATGGGCA ACATAGCTAC AAGTTCCGCC TGAAGTCGCT CTCGCCCTTC
ATGGAAGGCC GGGTGGTGGA GGTCACCGAT CCTCAAGCTC GCAGGATAGA CCCCCAAAAC
AGCGAGGCCT CAGTAATCGT TCTCCGCGAT GGCCAAGACC GGACCACCGC CCCCGACTAC
CCCTGGCAGC ACGATCAGGT GCCGCTGCCC CAGGACGACG AGTTGGTGAT CTACGAGCTG
CACGTGGGCG AGTTTGCCTG GGAGGGGGAT AAGCCGGGCA CCTTCGAGGG CTTGGTAAGG
CGGCTCGACT ACCTGCGCGA CCTGGGGGTG AACGCGGTGG AGCTGATGCC GGTGCAGGCT
TTCCCGGGCG AACGCTCCTG GGGCTACCTA CCCCGCCACT TCTTCGCCCT CGAGCCCGGC
TACGGCACCC CCGAGGACTT CAAACGGCTG GTGGACGAGT GTCACGCGCG GGGGATGCGG
GTTATTTTGG ACATGGTCTT CAACCACTCC GATACCGAAG CCCCGCTCAA CCACATCGAC
TTCTACTACT GGTACCGGGA CGCTCGCGAG GGAGAGCCTT CCTACGGCCC CAAGTTTGAC
TACGAGCGCA TAGATGACAC CCTGGGGGTG CGGCCCGCAT TCCGCTTCGG CCTCGAGGTG
GCGGCCTTCT GGGTGGAGGA GTACCACGTA GACGGCTACC GCCTCGATGC CACCGCGGTC
TTAAACAACT TCGAGTTCGT CCAAGCGGTG CGCGACCTAT GCAAGGAAAA AGCCGGGGGC
AAGCCTTTCT ACATCGTAGC CGAGCAGCTC CCGGAGAACC CGGCCATCGC TACCCCTACT
GGCCCTGCCG ATGGAGCTTG GCACCAGGCG TTTGAGCTGC AAGTGGTACC CGCCCTATGC
GAGGTGGGCG AACCGGCAGC CGCGCTCGAG GCCTTGCAGC CACGTAACCA CGGCTATATC
TCCCCAGCAC GGGTGGTCAA CTACCTCGAG TCCCACGACG AACACACCCT GATGCGGGTG
CTAGCCGAAG CCGGGATCAC CGGGGACAAG GCCTTCCGTA AAAACAAACT GGGAGCCACC
TTGCTCTTTA CCGCGGTGGG CAACCCCATG ATCCACCAAG GCCAGGAATT CGGTGGGCAC
CGCCCCCGCG ATTTGGAGAT ACGGCCTTTG CAATGGGAGC TGCTCGAGCA CGACTACGGG
CTCCACCTGA AGGAGCACTA TGCCTTTCTG GCCCGTCTAC GGCGGGAGAC TGCCGCCCTC
CGCAGCGAAG ACCTCGAGCC CCTCCACCTA GACGCCCAGG CTGGGGTGAT CGCCTACCGG
CGTGGCGGCG GAGGAGAAGT CGTCGTGGTA GCAAACCTGC GCGATGCCGA CCAGACCCTC
ACCCTGCCCT TCCCTGAGGG GGCCTGGCGC GAGCTCTCCT TCGGCTACGA CCTCGAGGTC
AGCAGTGCCC AGCTCAGCGA GGACTTTCCG GCCTCCTCGG CGAAAATTTA CATCCGGCGC
TCCTGA
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| Protein sequence | MPGGRIHRPQ RISTPLDGIS SWSDKPITMH KDQSGTWRAE VDLPDGQHSY KFRLKSLSPF
MEGRVVEVTD PQARRIDPQN SEASVIVLRD GQDRTTAPDY PWQHDQVPLP QDDELVIYEL
HVGEFAWEGD KPGTFEGLVR RLDYLRDLGV NAVELMPVQA FPGERSWGYL PRHFFALEPG
YGTPEDFKRL VDECHARGMR VILDMVFNHS DTEAPLNHID FYYWYRDARE GEPSYGPKFD
YERIDDTLGV RPAFRFGLEV AAFWVEEYHV DGYRLDATAV LNNFEFVQAV RDLCKEKAGG
KPFYIVAEQL PENPAIATPT GPADGAWHQA FELQVVPALC EVGEPAAALE ALQPRNHGYI
SPARVVNYLE SHDEHTLMRV LAEAGITGDK AFRKNKLGAT LLFTAVGNPM IHQGQEFGGH
RPRDLEIRPL QWELLEHDYG LHLKEHYAFL ARLRRETAAL RSEDLEPLHL DAQAGVIAYR
RGGGGEVVVV ANLRDADQTL TLPFPEGAWR ELSFGYDLEV SSAQLSEDFP ASSAKIYIRR
S
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