Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_1165 |
Symbol | |
ID | 9250658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 1152085 |
End bp | 1154937 |
Gene Length | 2853 bp |
Protein Length | 950 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | NHL repeat containing protein |
Protein accession | YP_003684572 |
Protein GI | 297565600 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0259008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGTGC TGTTTAGCGC TTCCGCCCTG CTCAGTGCAT GTACAGCCCC GCTACCCGCC CCCGATTTTG ACTTCTCCCT CAGCCCCGCG GCGGTTACCT TACAGCAGGG CTCGAGCCAG AACATCCAAG TGAGCGTTAC CCGCAAAGGT AGTTTTAGTG CTCCGCTCAC ACTGAGGGTG GAGGGTTTAC CTAGTGGGAT CAGCCATAGC GAGGCGGCTT TGCCGAGCGG AGCTAGCCAG ACGAACCTGA CTTTGTCCGC CAGCGAATCG GCGGTCTTAA CGGCAGGGGT TGACCTCACG GTTTGGGTCA GCGGGGGAGG TAAAGAGCGC AGCCGAAGCC TGCGCCTGAG CGTGGTGCCC AAACCTGATC TGCTGCTCGA GCTGAAGGGA AGCGAGATCT CGCTCTATAA AGGCGGGAGC AATACCATGG CCGTGCAGAT CTCACGGGTA GGCGGGTTTG ATGACCCAGT GAGCGTCAGT GTGGTCGGGC TGCCCGCGGG GGTCAGTGCC GATCCCCTGA CGATCCCTTC CGGCAGCAGT TTAGGAGCCC TTACCCTGCG GGCTCAAGCC GGTGCCGCAA CCCTTAGCGG TCAGCCGATC GAGGTGGAGG CCAGGGGAGG CGGGTTGGTT CGCACGGCTA ACCTCAACCT GACTGTGCTC GACGCCCCCA GCTTCATGCT CGAGCTAACC CCCAGCACCG TGGTCGTCGC GCCCGGCGAG GGAGGTTCGC TCCAGGTGAG CCTCCGCCGC ACCCCAGGGT TTGGCAGTCC GGTGAGCTTG GAATTGTTGA ACGCCCCCCC CGGAGTGACA GGCAGCTTCG ATCCCGATAC CGTCAGTGGG GACCAGAGCA TCCTCCGCCT CAGCGTGGCC GGGGCAGTTC CGCCGGGCGC CTACACCCTC AGCGTGCGTG GCAGCGGGGG AGGCCAGGAG GCTATACAGA ATCTGGTACT GATAGTTTTC GGGTTCAGCC TGACCTTGAG TCCAGCCACC CTGACTTTGC AACAGGGTGA ACAGGGTTCC TCAGCGGTGA CGTTGATGCA AAAAGGCGGC TTTGGTGGCG CAGCGACCCT CAGCATCTCG GGTGAGATCG TGGGTAGCGG ACCGGACAAG GTAGCGGCGG TTTTCAGCCC GAACCCCCTT CCCAGTGGCA CCAGCATTCT TACCCTGAGC GTCGGGTCAG CTGTACCGGC GGGGGTCTAT ATCCTGAACC TTACTGGGGT CAGCGGGAGT TTGAGCGACA GCAAGATCCT GCAACTCACC GTAACCCAGC CGAGCCTGAG CCTCGACCCC GAGAGCGCTA CCGTGCTGGG TAAAGACCCC CCTGAACCTG CCCAGATCTC CTTGAGGGCC ACCCTGAGCG GGGGGAGCGG GCAACTTCGT TGGGAACTGG CTGGCCCCGG CTCACTCTCG AGCACCACCG GCTCGAGCGT GACCTATACT CCCCCAGTCT GTTTCTCCAG CGCAGCCACC GCTTTAGTGA CTGTGAGCGT GGAGGGCACC AGCGCCCGTA AGACAGCGAC CATCGCGCTC AACCCAGCCA CCCGCAACGA CCTGACCGTG AACTTTACCG GTCTGCCCAC TGGCCTGAGC GGATCGGTAC GGGTTCAAGG GCCGGGGGAC TTTGACCGCA CCCTCACCGC CAGCCAGACC CTAAGGGACG TTCCAGGGGG CACCTACACC TTCACCCCCA AGGGTGCAGT CCAGCAAGGA TCTGTGGCCG ATTGGTACTA CCAGGCTAAC CCCGCAACCA TTACCCTCTC GCCCTGTCGC CCGGCGACGG TAAACCTACC CTATCAACAG CGACCGGGAA CGGGCCGACT CTGGGTGGTG GATAACTCCA CGAAGCAGCT CCGGGGTTAC CTCCAAGGCA GCGGCACCCC GGTGGAACTA AACCTGAACC TCTCCGGCCC TGAACTGATG GCTCTCGACC CTCAAGGCAA CCTCTGGATC GCTGACTACT TGGGCAACCA GGTAGTAATG TACGCTGCGC AGGATTTGGC CGCAGGGGGA AGTCCGGCAG CCCGGCTCAA GATCACAGGT AGCGGGATAG ACGGTCCTAG CAATGTGGCT TTCGATGCCC AAGGCAACCT CTGGGTAACA GACTGCGGAT CGGGGGTCAG GCCCAATGCG GTGGTCAAAT ACCAAGCGAG CAAGTTGACC GGGAATTATA GTGGAGAACC TGACCTGGCA ATCACCACCT GGAGCGGCCA TCTCAACTGC CCCTCGTCGC TGACTTTTGA CGCGACAGGA AACCTGTGGG TAGCCTCGTT CCTCTCCGAC GAGATCCTCA AGTACACCCC GTCCCAGTAC GCTGCTTCGT ATTCGGGTCG CCCAGCCCTC ATCGTGCATG GGGCTTCGAC CCAGATCCTG CGCCCGACCA ATCTCGCTTT TGACTCGCTG GGTAATCTCT GGGTCTCGAG CATCCAGAGC GGAATGCTGC TCCGCTTCGA TAAGAACACC TTGCCCCCAG ACTGCGACCC CTTGCCCGCT TGCACTGGGG GGACAGGGAC TTACGAAGCC GCGCCGAGCA AAGTGGTGAC GGGTCTCAAT CAGCCCTGGG GGTTGGCCTT CGACAACCAG GGTGATCTCT GGGTGACCGA AGGAACCCCC TGGTTAGGCC CTCAGGCTCT GGGGGTGAGC CCACAAAGCC CTCGAGCCCT GCGGCTTCAG AGTTTGGTAG GTGTCCGGTC ACAAAGCGCG GATAAGCGGG TTTTGAAGTT TGCTGCAGCG GACATTGAAG CCGGGGGAAC TCCAACCCCA GTCGCGGAAC TCGGCGGTTT CACCGCCCCG GCTGGGCTGG TCCTCAACCT TCCTCCGGCA GGACTCCCGT TCTACAGCCG TCCGGCTCCA TAA
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Protein sequence | MVVLFSASAL LSACTAPLPA PDFDFSLSPA AVTLQQGSSQ NIQVSVTRKG SFSAPLTLRV EGLPSGISHS EAALPSGASQ TNLTLSASES AVLTAGVDLT VWVSGGGKER SRSLRLSVVP KPDLLLELKG SEISLYKGGS NTMAVQISRV GGFDDPVSVS VVGLPAGVSA DPLTIPSGSS LGALTLRAQA GAATLSGQPI EVEARGGGLV RTANLNLTVL DAPSFMLELT PSTVVVAPGE GGSLQVSLRR TPGFGSPVSL ELLNAPPGVT GSFDPDTVSG DQSILRLSVA GAVPPGAYTL SVRGSGGGQE AIQNLVLIVF GFSLTLSPAT LTLQQGEQGS SAVTLMQKGG FGGAATLSIS GEIVGSGPDK VAAVFSPNPL PSGTSILTLS VGSAVPAGVY ILNLTGVSGS LSDSKILQLT VTQPSLSLDP ESATVLGKDP PEPAQISLRA TLSGGSGQLR WELAGPGSLS STTGSSVTYT PPVCFSSAAT ALVTVSVEGT SARKTATIAL NPATRNDLTV NFTGLPTGLS GSVRVQGPGD FDRTLTASQT LRDVPGGTYT FTPKGAVQQG SVADWYYQAN PATITLSPCR PATVNLPYQQ RPGTGRLWVV DNSTKQLRGY LQGSGTPVEL NLNLSGPELM ALDPQGNLWI ADYLGNQVVM YAAQDLAAGG SPAARLKITG SGIDGPSNVA FDAQGNLWVT DCGSGVRPNA VVKYQASKLT GNYSGEPDLA ITTWSGHLNC PSSLTFDATG NLWVASFLSD EILKYTPSQY AASYSGRPAL IVHGASTQIL RPTNLAFDSL GNLWVSSIQS GMLLRFDKNT LPPDCDPLPA CTGGTGTYEA APSKVVTGLN QPWGLAFDNQ GDLWVTEGTP WLGPQALGVS PQSPRALRLQ SLVGVRSQSA DKRVLKFAAA DIEAGGTPTP VAELGGFTAP AGLVLNLPPA GLPFYSRPAP
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