Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_0894 |
Symbol | |
ID | 9250386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 886759 |
End bp | 887403 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_003684314 |
Protein GI | 297565342 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0679919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0128981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGGACC TGCGCGAACT CCTCCCCGAT TACCTGTTGG GCCAACTGAG CCTCGCAGAA ACTCGCGAGG TCGAGGCCTG GCTTGAGGCT TCCCCCCAGG CGCGAGCGGA GCTTGAAAGC CTCGAGTCCG CCCTTTTCGC GCTCCCCCAG GGGCTGGTTC CAGTGAACCC ACCTCCCCAC CTGTGGGGCG AGGTTACGAA GCGTTTACAC AGCAAACCCC TGGGCCGCTC CCGCTCCCTT TGGGTAGGGG GGATCGCCGC AGCCTTCTTG GTGTTGGCGG GCTGGGGAAT TTTTTCCTTT GCCAGCTACC GCGCCTTGCA GGCCGAACAG GCCCAGCTGG CGCACTGGCT TGCGCTCCCT GCACAGTGGC ACCTTCTGAA GAACGCTGAA GGGGAGGGAA TCGGTAGCAT GATCTGGACC AAGGACGGCG GCTGTTTGAT CGTGATGCGC GATCCTCCCC CTGCGGGAAA GGTCTACCAG GCCTGGGGGA GTGAGAAGGG CCGTAAGGTC TCGCTGGGGA CTTTCCGCGG GCGGATTTAT GAAACCAACT TCCTGGGCTT CGACCGCATA GGGGTGAGCC TCGAGCCCCC AGGGGGAAAC CTTCAACCCA CCGAGCCGCT GATTTCGATC CCGATCCAGG GTTAG
|
Protein sequence | MRDLRELLPD YLLGQLSLAE TREVEAWLEA SPQARAELES LESALFALPQ GLVPVNPPPH LWGEVTKRLH SKPLGRSRSL WVGGIAAAFL VLAGWGIFSF ASYRALQAEQ AQLAHWLALP AQWHLLKNAE GEGIGSMIWT KDGGCLIVMR DPPPAGKVYQ AWGSEKGRKV SLGTFRGRIY ETNFLGFDRI GVSLEPPGGN LQPTEPLISI PIQG
|
| |