| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2466 |
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| Symbol | |
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| ID | 4847189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 2443538 |
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| End bp | 2445214 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640117176 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001048369 |
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| Protein GI | 126180404 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCCA CTACCGACGC ACTCTCTCTC CTGCTGCGAG CCCTGAAAGA GCATCCGCGC
GGCATGTCGG TCTCCGATCT TGCCGCAGCC GTCGGGATCA ACCGGAACAC CGTCTCCCGG
TACCTCGACG TCCTCCTGGT ATCGGGCCAG GTGGAGATGG AGACCTACGG GAAGGCCAAA
GTCTTCTACC TCTCGCAGAG GGTTCCCATC GCCGCCATGC TCAACTTCTC GTCGGATCTC
GTGCTGGTGC TCGACCGGGA TCGTCGGATC GTCCAGGCAA ACGACGCCGT CTGTTCGTTT
GCGGGGAGGG AGCGAGACGA TATCATCGGG AACTCCATCG AGGCGTCGCC GCTCGCCGCG
TTCGACCACC CGCTGATACG GAGCCGGATC ACCGACGCCC TGAACGGCCG CGAGGTCACC
GAAGAACTCC GGTTTCTGCG GCAGGACGAG GAACTCTTCT TCAGGATCAA GTTTCTCCCC
ACTGTCTTCA ACGACGGGGC GCCGGGCGTC ACCATCATCC TCGAGGAGAT CACCGAGGGA
CGGCGGGCGG AAGAGGCTCT GCGCGAGAGC GAGCTCCTCT TTAGAAGCCT CGTCGAGAAC
ATCAGCGACC TGATCCTGAA CGTCGACGAA GCCTGCACGT TCACCTACGT CAGCCCCAAA
AGCCGGGAGA TCCTCGGCTA CGCGCCCGAA GAGATGCTCC GAAAGACCCC CTGCGACTTC
ATGGCCCCGG AGAAGGCGGA ACCCGTCAGG GAACAGTTTT CCGCACTTTT AGCCGAGCCG
AGACCGCGAG TCCTCTTCGA ATGGACGATG CTCCACCGGG ACGGAAGCCC CGTCGTTCTC
GAGGTGAGCG GGACGCCGGT TTACGACGTG ATCGGCGACT TCACCGGTTA CCGGATGGTC
TGCCGCGACG TCACCGAGCG GACGCGTGCC GCAAAAAGGG TAGCCCAGTG GAAGTCGTTC
CTCTACTCGG TGGTCAACAA CATCCCGAGC ATGGTCTTTG TCCGGGAAGT GGAAGAAAAC
ACGTTTGTCT TCTCGAATAA GGCCGCCGAG ACGTTCCTCG GGATGACACA GGAGGAGATG
GCGGGAAAAC GGGCCGCGGA GATCTTCCCG CCGGAGATGG CGACATTCTT TGCCGACGGC
GACCGGGAAC TCGTGGAGCG GGCGGCCGCC CTTGAGAAGG AGATCCGGAC AGAGGGCGGG
CGGACGCTCT CCATGAAGAA GATCCCGATC TTCAGTTCAA GGGGCATGCT GAAATACATG
CTCGGGATCG CCGAGGACGT CACCGATCGC GCCGCCGCGG AGATTCTCCT GATCGCCGAG
CGCGACCGGG CGCAGGGATA CCTGGAGGCG GCAGGCGTGA TGATCGCGGT GATCGGGGCG
GACGGCACCA TCGACCTCGT CAACCGGAAG GCGAGCGAAA CCCTGGGATA CGCCGAGGGA
GATCTTGCGG GAAAGAACTG GTTTGCGACG GTCGTTCCCG AGCGGCTGCG CGACCGGCTC
GCGCAGAACT TCAACCGTCT CGTGGCCTGC GGCGTCGAAC CTCCGCCGTT CGAGGAGAGT
CCGGTCGTCA CGCGGGACGG GCGGGAGCGG CCGATCCTCT GGCACAACGC CCTTCTGCGG
GACGCGGACG GCAACGTGGT GGCGATGGTG AGTTCCGGGG AAGAGGTTGC GGAGTAG
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| Protein sequence | MDPTTDALSL LLRALKEHPR GMSVSDLAAA VGINRNTVSR YLDVLLVSGQ VEMETYGKAK
VFYLSQRVPI AAMLNFSSDL VLVLDRDRRI VQANDAVCSF AGRERDDIIG NSIEASPLAA
FDHPLIRSRI TDALNGREVT EELRFLRQDE ELFFRIKFLP TVFNDGAPGV TIILEEITEG
RRAEEALRES ELLFRSLVEN ISDLILNVDE ACTFTYVSPK SREILGYAPE EMLRKTPCDF
MAPEKAEPVR EQFSALLAEP RPRVLFEWTM LHRDGSPVVL EVSGTPVYDV IGDFTGYRMV
CRDVTERTRA AKRVAQWKSF LYSVVNNIPS MVFVREVEEN TFVFSNKAAE TFLGMTQEEM
AGKRAAEIFP PEMATFFADG DRELVERAAA LEKEIRTEGG RTLSMKKIPI FSSRGMLKYM
LGIAEDVTDR AAAEILLIAE RDRAQGYLEA AGVMIAVIGA DGTIDLVNRK ASETLGYAEG
DLAGKNWFAT VVPERLRDRL AQNFNRLVAC GVEPPPFEES PVVTRDGRER PILWHNALLR
DADGNVVAMV SSGEEVAE
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