Gene Memar_2345 details

Gene Information

• Locus tag: Memar_2345
• ID: 4847773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 2332409
• End bp: 2334298
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640117055
• Product: integral membrane sensor signal transduction histidine kinase
• Protein accession: YP_001048250
• Protein GI: 126180285
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGCGA AGAGTCCCGT GCGACCGTCG CTTCCACTCA TGCTCTATCT TTTGCTTGCG 
ATTCTCCTCG CGACGGTCCC TGTCGTCTTC CTGCTCTCGG TTGTCGATTC GGCGGCGGTC 
CGGCAGGAAC TGGAGGTGAA TACCGAAGAG TCCCGGAACC AGACCGAGTC CGGCATCGTC 
CTCGCGGTAA ACCTGGTGGA TACCGGGTTG AAACTCTTCG ACAGGACGTT GAACCAGGAG 
ATGGAGGAAG GATTCGATCT GTTTATCGCC GAGTATGAGC GGGCGGGAAG GGATCCGGGA 
GAGATGGATC TCTCCCGCGT TAAGGAGGAA CTCGGGGGCA GGATGGATCT CTATATTATC 
GACGAAGACG GCGTCATCGT CTATACCACT TACCCTCCTG ACCTTGGTCT TGATTTCAGG 
CAAATTCCCG ATTTTTACGG CAGGATAACT GGGATCCGGC TCGGAGATTC GTTTGCTGCC 
GACAGGGTCG TCTCCGGGAT CTCGTCAGGG GAACTCCGGA AGTACGCGTA TCGGCCTTCT 
CCGGATCACC GCTACCTCTT CGAACTCGGT CTTGCGAGTT CCGAGTTCCA GCAGTACCGC 
ACAGCGCTGA AGTACCGGGA GACCGTCAGG GAACTTGTGG ACGAAAACCC GGACGTTATC 
GAGATCCGGA TCTTCGACTG CCTGGGGGAG ATGATCACCG GCGAGGCGCA TCCCGACGAT 
GACCGGCGGT TGGAGTTCGT CCGCAAGGCT TACCGGGAGA AGGCCATGAT CGAGGTGGAG 
AACGCCACTG CAGGCGAACT GACACGCTAT GTCTTCGTCG ATATGGCGGA CCTCGATTAC 
GCATCCGACA TGAGCCTGGT CGTAGAACTG ACCTATACCA CGAGGAGGGC GGAGGCGGAA 
CTTGCCGGAA TGCTCGACCG GCATGGGGGT GTCCTGCTCA TTGCGTTCTT CTGCGTCGGC 
TCTCTCTCGG CCCTCGCCGC GCACCACCTG ACGCGGCCGA TACGCATCCT TGTCGAGGAC 
GTCGATGCCA TCGCCCGCGG CGATCTGGAG CGTCCCGTGC GGGTGAGCGG GGACGAGGAG 
TTCGTACACC TCGCGGAGAG CGTCTCGGCG ATGGTCGGAT CCTTAACGGA AACTATCCAG 
AAGATCCGGG AGTCGGAGGA GGAGATCGTC CGGCACAGCC GTGTCCTCGA AGAACAGGTC 
CGGGAACGGA CCGCTGCCCT CGAGGAGTCC AACCGGATGG CGACCCTCTA CCTGGACATC 
ATGGGGCACG ATATCAAAAA CGCAAACAAC GTCGCAAACC TCTACGCCGA CCTTCTCCAC 
GCCGAACTCG AGGGAGAGCC CGAGGCCGAG GTGCTCGGGA AGGCGAGGAA GGGGCTTACG 
AAGAGTATTG AGATCGTCCA CAACGTCAAC ACCATCCAGC GGGTTCAGGG TGGCGTGCCG 
TCGCTTTGCC CGATCAACCT TGATGCCGTT GTCAGGGCCG AGATTGAGCG TTCTTCCGTC 
CCAATAACCT ATTCCGGCAC CACGGTCATC GTCCTCGCCG ACGACCTCCT CTCCGAAGTC 
TTTGCGAACC TCATCGGCAA CGCGGCGAAG CACGCCGGGC CGGCGGTCGA GATCGTCGTC 
CGGGTCGAAG AGCACGGAGA GGAGGTACTG GTCGTTGTCG AGGATACCGG GTCGGGCATC 
CCGGACGCAG TAAAGGTCCG GCTCTTCGAG CGGCTGGTTC GGGGAACCCA CGGCACGGCG 
GGGACGGGAC TCGGTCTCTA CATCTGCCGG ATGCTCATCG AACGCTACGG CGGGAGGATA 
TGGGCGGACG ACCGGGTGGG GGGGTGCCCG GAGTGCGGCA CCGCCATCCG GTTTACGCTC 
CGCAAGGCCA CAGAGGAGGG CGATCCATGA 

 

Protein sequence

MTAKSPVRPS LPLMLYLLLA ILLATVPVVF LLSVVDSAAV RQELEVNTEE SRNQTESGIV 
LAVNLVDTGL KLFDRTLNQE MEEGFDLFIA EYERAGRDPG EMDLSRVKEE LGGRMDLYII 
DEDGVIVYTT YPPDLGLDFR QIPDFYGRIT GIRLGDSFAA DRVVSGISSG ELRKYAYRPS 
PDHRYLFELG LASSEFQQYR TALKYRETVR ELVDENPDVI EIRIFDCLGE MITGEAHPDD 
DRRLEFVRKA YREKAMIEVE NATAGELTRY VFVDMADLDY ASDMSLVVEL TYTTRRAEAE 
LAGMLDRHGG VLLIAFFCVG SLSALAAHHL TRPIRILVED VDAIARGDLE RPVRVSGDEE 
FVHLAESVSA MVGSLTETIQ KIRESEEEIV RHSRVLEEQV RERTAALEES NRMATLYLDI 
MGHDIKNANN VANLYADLLH AELEGEPEAE VLGKARKGLT KSIEIVHNVN TIQRVQGGVP 
SLCPINLDAV VRAEIERSSV PITYSGTTVI VLADDLLSEV FANLIGNAAK HAGPAVEIVV 
RVEEHGEEVL VVVEDTGSGI PDAVKVRLFE RLVRGTHGTA GTGLGLYICR MLIERYGGRI 
WADDRVGGCP ECGTAIRFTL RKATEEGDP