Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2080 |
Symbol | |
ID | 4846760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 2070347 |
End bp | 2071162 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640116788 |
Product | helix-turn-helix, type 11 domain-containing protein |
Protein accession | YP_001047987 |
Protein GI | 126180022 |
COG category | [S] Function unknown |
COG ID | [COG3398] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCGGT GGAGCCGGAT CTTTTCCATT CTCTTCGTTG CCGTGACCTT CGCGGGCATT TCGCTCCCGG GCACGGCAAC CGCCGGTTAC GCGGTCGAAC CGGCGTTGGA GGGTTACCCC GGAGAACTAT ACGACTTTGA GAAGAGCACA CTTCAGGAAA AACCGCTCCT GGTGATGTTT TTCCACTGCC TGCTCGTGAT TCTCCCCGCA TGCTTCTTCC CCGGCGAACT CCTCTACATT CTCAGCATCT TCCTGCCGTT CGGTTTCCGG CGGGTAACGA AACGAACCAT CCTCGACGAC GACTTCCGGC TCAACCTCTA CCGGAAGATC GCCGCAAACC CGGGTGCCGG TGCCGTGGAG CTCGGCGAGA TGACAGGTGT ATCGAGAGGA AGGCTCCGGT ACCACCTCAA CATGCTCATC CGGGAGGGAA AGGTGGCTGC CGTGGATTAC CGGAACCGCA CGGGCCACTT CGCGCGTAAC CAGAGGCATA CCGATCTCGA GCAACGTATT CTCATCAGCC TCCGGGAAGA ACCCTCCAGA ACGATCCTCA GGTACCTCCT CGGGTCTCCG GAAACAACGC GGAACGACGT CGCGGAACGG CTCGGGCTCA CCGGTTCGAC CGTCTCCCAG CACATGCAGG AACTGAAGAC CGAAGGGATC GTCACTGTAG GCAGGGACGG GCGGTTCGTC CGCTACAGGC TCTCCGAAGA TGCCGAGGAA TTCTTCAATC AATGTCTGGA TGACCTCCCT ATCTCCAGGC ATCCCAGCAC AGGGAATTAT CGCGCCACAA GAGGCCACGA GGACTCGTCG GGTTAG
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Protein sequence | MVRWSRIFSI LFVAVTFAGI SLPGTATAGY AVEPALEGYP GELYDFEKST LQEKPLLVMF FHCLLVILPA CFFPGELLYI LSIFLPFGFR RVTKRTILDD DFRLNLYRKI AANPGAGAVE LGEMTGVSRG RLRYHLNMLI REGKVAAVDY RNRTGHFARN QRHTDLEQRI LISLREEPSR TILRYLLGSP ETTRNDVAER LGLTGSTVSQ HMQELKTEGI VTVGRDGRFV RYRLSEDAEE FFNQCLDDLP ISRHPSTGNY RATRGHEDSS G
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