| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2007 |
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| Symbol | |
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| ID | 4846501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1993834 |
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| End bp | 1995729 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116713 |
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| Product | ATPase |
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| Protein accession | YP_001047915 |
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| Protein GI | 126179950 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1855] ATPase (PilT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00148189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG TACCCGATAC AAGCGTCGTG ATAGACGGAC GCATAACATC GCTGATAAAA
ACCGGAGAAT ATAAGGGCGC AACAATAATC ATACCGGAAG CCGTCGTCGC CGAGTTGGAG
GCCCAGGCAA ATCAGGGGCG GGAGATAGGG TTTTCCGGTC TGAACGAACT CCAGGAACTC
TTCCGGATGT CGGGAGAGAA CGTCATCCAA CTCCGGTTTT CCGGAGAACG CCCGAGCCTC
GACCAGGTGA AACTCTCCAG CGGGGGCGAG ATCGATGCCC TGATCCGGAA CGTCGCGATC
GACCACGATG CACGGTTCAT CACGAGCGAT CTCGTGCAGG CGGAGGTGGC AAAGGCCAAA
GGTCTCGACG TCACCTACCT GCGGCCGCAG ATCGGCGACT TCTCGCCGCT CTCGATCGAC
CAGTACCTCG ATGAGGAGAC GATCGCGATA ACTCTTAAGG AGCGGGCTCA GCCGGTGGCA
AAGATCGGGA AACTCCGGGA TACCCGCCTG GTAACCCTCC GGGATGCGCC GATGACCGAG
TACGAGCTCA AGGGCATGGC GCAGGAACTC CTCGAGCGGG CGAAACGCGA CCCGGACGGC
TTCATCGAAC TCGAGAAGCG GGGGATCACG GTCGTCCAGA TCGGGTCGCT CCGGATCTCG
ATTGCCCGGC GGCCGTTCTC GGACGGGATG GAGATCACGG TCGTCCGGCC GCTCGTCGAC
CTCTCGCTCG ACGACTACGA CATGGCACCG GAGATCAAGC AGCGGATCCT CGGGAACCGC
CGCGGTGTCT TGATTGCAGG TCCGCCGGGC GCGGGGAAGA CCACCCTCGC CCAGAGCCTT
GCGACGTTCC TCGCCGACAA CAACTTCGTC GTGAAGACGA TGGAGGCGCC GCGCGACCTG
CAGGTGCCCG ACCACATCAC CCAGTACACG GCGCTCGAGG GCAGCATGGC GAACACCGCC
GAAGCCCTCC TGCTCGTCCG GCCCGACTAC GTGATCTTCG ACGAGATCCG CAAAAGCGAG
GACTTCAACG TCTATGCAGA CATGCGCCTC GCCGGGATGG GCATGGTCGG CGTGGTGCAT
GCCATGGAGG TGCACGACTG CCTCCGGCGG TTCTGCGACC GCGTGGACTA CAGCATCCTG
CCGCAGATCA TCAACACCGT CATCTACGTT GTTCAGGGCG CGATCACGAA GATCTACGAC
CTCGAGCTGG CGATCAAGGC ACCTGAAGGG ATGCCCGGCG ACGTGCATAT CCGCCCGGTG
ATCGTCGTCC GCGACCACGC CCGGCGGGAA CCCGAGATCG AGATCTTCCG CTACGAGGGA
GAGACCCTGG TGATGCCCCT CGGCCGGAAG AGGAACGCCG CAGGACCGGC CGCCGCACCG
GCGGAGCCGC CGGTCGTCGC GGCACCGGCT GCGGAGCCCG AGGAGAACGT CACCTGGAAG
GTTGCCGAGA AAGAGGTCCA GCGCGAGATC GGGCGGTACA CGACCGGCCC GGTCGAGGTC
CGGATCATCA GCGATAACAA GGCCGTCGTC TACATCGAGG ACAAGGACGT CCCGGCGGCG
ATCGGGAAGG GCGGCAAGAA CGTCTCGGCG ATCGTGAACA AACTCGGTAT CGGGATCGAT
ATCCGGCCAA AAAGCGAACT CGAGGCGCAG AAACCCGTCG AGGAAGAGAT GCAGCTTGTC
GGCGGCATCA AGATCCGTCT CGACAAAAAA CAGCTGACGA TCGTATCCCC CGAGAACAGG
GGCAAGATCG TGGACGTCTT CGCCGGGAAG GAGTATCTCT TCACGGCCAC GGTGAACGAG
GAGGGGGACA TCCTCCTCGC CAAGAACAGC ACGATCGCCC AGGAGATGAT CAAGCGCTAC
AACGAGGGCG AGACGATCCG GTTAAGACCG GTATGA
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| Protein sequence | MKIVPDTSVV IDGRITSLIK TGEYKGATII IPEAVVAELE AQANQGREIG FSGLNELQEL
FRMSGENVIQ LRFSGERPSL DQVKLSSGGE IDALIRNVAI DHDARFITSD LVQAEVAKAK
GLDVTYLRPQ IGDFSPLSID QYLDEETIAI TLKERAQPVA KIGKLRDTRL VTLRDAPMTE
YELKGMAQEL LERAKRDPDG FIELEKRGIT VVQIGSLRIS IARRPFSDGM EITVVRPLVD
LSLDDYDMAP EIKQRILGNR RGVLIAGPPG AGKTTLAQSL ATFLADNNFV VKTMEAPRDL
QVPDHITQYT ALEGSMANTA EALLLVRPDY VIFDEIRKSE DFNVYADMRL AGMGMVGVVH
AMEVHDCLRR FCDRVDYSIL PQIINTVIYV VQGAITKIYD LELAIKAPEG MPGDVHIRPV
IVVRDHARRE PEIEIFRYEG ETLVMPLGRK RNAAGPAAAP AEPPVVAAPA AEPEENVTWK
VAEKEVQREI GRYTTGPVEV RIISDNKAVV YIEDKDVPAA IGKGGKNVSA IVNKLGIGID
IRPKSELEAQ KPVEEEMQLV GGIKIRLDKK QLTIVSPENR GKIVDVFAGK EYLFTATVNE
EGDILLAKNS TIAQEMIKRY NEGETIRLRP V
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