Gene Memar_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1961 
Symbol 
ID4847378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1956079 
End bp1956372 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content56% 
IMG OID640116667 
Product50S ribosomal protein L21e 
Protein accessionYP_001047869 
Protein GI126179904 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.613539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACATC ACAATGGACC ACGCAAGAAG ACGCGGTATA AGTTCAAGAA GGACCTCAGA 
AAACGTGGCA TCCCCCCGGT AACCTCGGTG ATTCAGAGCT TCGAGATCGG GCAGAGAGTG
CACGTCGTGG TCGAGCCGAG TGTCCAGAAG GGCATGCCCC ACCGGAGATT CCACGGGAAG
ACCGGCACGG TCATCGGCCA GCGCGGACGC GCATGGCTGC TCGAAGTCAG GGATGGAGAT
TCGGTAAAAC AGGTGATTGC GAGACCGCAA CATCTAAAAG CGCAGAAAGT ATAA
 
Protein sequence
MAHHNGPRKK TRYKFKKDLR KRGIPPVTSV IQSFEIGQRV HVVVEPSVQK GMPHRRFHGK 
TGTVIGQRGR AWLLEVRDGD SVKQVIARPQ HLKAQKV